Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Regulatory protein LuxO from Xanthobacter sp. DMC5

 Score =  294 bits (753), Expect = 4e-84
 Identities = 167/387 (43%), Positives = 231/387 (59%), Gaps = 18/387 (4%)

Query: 71  IVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRL--RVTVNNAIRKASKLKNDVDN--KN 126
           +V   +  S+  AV AMR GA D + KP   + +  R+      R+  + +       + 
Sbjct: 83  LVVALSESSVTDAVAAMRAGADDVVQKPLVVEEVMDRLLAATPARRPERRRRAARPLPRG 142

Query: 127 QNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIA 186
            ++ G  G S  MQAVY  I+  A+S+A++F+TGESGTGK++ A A+HAAS R D PF+A
Sbjct: 143 GDFCGLYGRSTAMQAVYAQIERLAASRAAVFVTGESGTGKDLVAAAVHAASSRRDAPFVA 202

Query: 187 INCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLR 246
           +NCA IP +L+E  LFG           E  GA + A  GTL LDE+ +M+   Q +L+ 
Sbjct: 203 LNCAVIPAELMEVALFGR----------EDAGAMDRAQSGTLHLDEITQMEPACQARLMH 252

Query: 247 FIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRAR 306
           F++TG F  VG    +  DVR VCAT+RDP +EV+ GR REDLYYRL V+PL LPPLRAR
Sbjct: 253 FVETGRFSPVGEVAEREADVRLVCATSRDPLEEVRAGRLREDLYYRLAVLPLALPPLRAR 312

Query: 307 GDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVVVLNEGR 366
           GDDV+ +A + L   + EEG+   R + EVVE  R   +PGNVR+LQN++R VV+L+EG 
Sbjct: 313 GDDVLLLAETFLARFAGEEGRPMPRFTPEVVEALRARRFPGNVRELQNLMRQVVILSEGG 372

Query: 367 EITLDMLPPPLNQMSAPINRALPLAHENKVSVH----EIFPLWMTEKQAIEQAIEACDGN 422
            I   +L  P    +    R+  +  +     H     + PL + E++AIE AI A DGN
Sbjct: 373 TIPPGLLAEPAAPEADTPGRSPEVFIQGWSEGHAWHGRVEPLAVIERRAIEAAIAAFDGN 432

Query: 423 IPRAATYLDVSPSTIYRKLQTWNEKVK 449
           I  AA  LD+SPST+YRK   W E+ +
Sbjct: 433 ISLAAAALDLSPSTLYRKKLAWGERTR 459