Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (782), Expect = 2e-87
 Identities = 174/462 (37%), Positives = 256/462 (55%), Gaps = 26/462 (5%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D +S+  +    L+   I           + ++ R  PD+++ D+R+P M G+ +L 
Sbjct: 8   VVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLN 67

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            V +++P++P++ MTAH  +D AV A + GA ++L KP + D     V  AI    + + 
Sbjct: 68  QVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRK 127

Query: 121 DVDNKNQNYQG--FIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASK 178
                ++NY     IG +  MQ V+R I   + S  S+ I GESGTGKE+ A A+H  S 
Sbjct: 128 TSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAHALHRHSP 187

Query: 179 RGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDL 238
           R  KPFIA+N AAIPKDLIESELFGH KGAFTGA T RQG  E A+GGTLFLDE+ +M L
Sbjct: 188 RAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIGDMPL 247

Query: 239 DLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPL 298
           D+QT+LLR +  G F +VG      VDVR V AT+++  K V +G+FREDL++RL VI +
Sbjct: 248 DIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRI 307

Query: 299 HLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRN 358
           H+P LR R  D+ ++    L   +KE G +   L+   V+   + +WPGNVRQL+N+ R 
Sbjct: 308 HIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRW 367

Query: 359 VVVLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMT----------- 407
           + V+  G E+    LP  L      ++       +N +S  +    W             
Sbjct: 368 LTVMASGSEVLPSDLPSEL------LSERKASHFDNDISWQKQLETWAKSALASGETELL 421

Query: 408 -------EKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
                  E+  +E A+   +G+   AA  L    +T+ RKL+
Sbjct: 422 AYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLK 463