Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Nitrogen regulation protein NR(I), GlnG (=NtrC) from Sphingobium sp. HT1-2

 Score =  292 bits (747), Expect = 2e-83
 Identities = 171/468 (36%), Positives = 263/468 (56%), Gaps = 37/468 (7%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  ++  +    L      + I G+ R+ +  +    PD+++ D+ LPD  G+D + 
Sbjct: 9   VVDDDPAICVVVGEALRRQGHKVKIAGSIRERMALMESFSPDILITDVMLPDGDGLDGVA 68

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            + E+ PD+ ++ ++A  +++TA+ A   GA ++L KP + + L   V +A+   S    
Sbjct: 69  EIIERKPDLNVIILSAQNTLNTAIRATEKGAFEYLPKPFDLNELTRAVADALGHRSG-GA 127

Query: 121 DVDNKNQNYQGF--IGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASK 178
           D   +   + G   +G S  MQ VYRTI    S+  SI + GESGTGKE+ AEAIH+  +
Sbjct: 128 DAAEQGLPHDGLPLVGRSPAMQEVYRTIARVLSNDLSILVLGESGTGKELVAEAIHSLGQ 187

Query: 179 RGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDL 238
           R  +PF+AIN AAIP++LIE+ELFG+ KGAFTGA     G  E A GGTLFLDE+ +M +
Sbjct: 188 RRTRPFVAINMAAIPRELIEAELFGYEKGAFTGAQARTAGKFEQAQGGTLFLDEIGDMPM 247

Query: 239 DLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPL 298
           + QT+LLR +Q+G    VG SK   VDVR + ATN+D  + ++E RFR+DLYYRL V+P+
Sbjct: 248 EAQTRLLRVLQSGEVTTVGGSKPVRVDVRIIAATNKDLPRLIEENRFRQDLYYRLNVVPV 307

Query: 299 HLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRN 358
            LPPLR R +DVI +A   L   + ++G     L+ +  +    Y WPGNVR+LQN+++ 
Sbjct: 308 SLPPLRERREDVILLARHFLD-RAAQDGLPRKALAEDAAQLLMAYHWPGNVRELQNIMQR 366

Query: 359 VVVLNEGREITLDMLPPPL-------------------------NQMSAPINRALPLAHE 393
           + VL+    I  DML   L                          Q+   + +A P  H+
Sbjct: 367 LAVLSRENVIAADMLRHALPLDAEPADHAAPAGQLAQAVREWTKRQLGVGLGQANPQLHD 426

Query: 394 NKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKL 441
           N ++V         E   +++ + + DGN  RAA  L ++ +T+ +KL
Sbjct: 427 NLLAV--------IEPILLQETLASVDGNQIRAAGLLGINRNTLRKKL 466