Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 5e-81
 Identities = 172/455 (37%), Positives = 254/455 (55%), Gaps = 15/455 (3%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  S+  +    L    +      +    +  + R++PD+I+ D+R+P  +G+D+L 
Sbjct: 9   IVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMGRLARQQPDVIISDIRMPGTSGLDLLA 68

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            ++E+ P +P++ MTAH  +D+AV + + GA ++L KP + D     V  A + A + + 
Sbjct: 69  QIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQG 128

Query: 121 -DVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKR 179
            DV          IG +  MQ V+R I   + S  ++ I GESGTGKE+ A A+H  S R
Sbjct: 129 LDVPQNLARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALHRHSPR 188

Query: 180 GDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLD 239
              PFIA+N AAIPKDL+ESELFGH KGAFTGAA  R+G  E ADGGTLFLDE+ +M  D
Sbjct: 189 AASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIGDMPAD 248

Query: 240 LQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLH 299
            QT+LLR +  G F +VG      VDVR + AT+++    VQ G+FREDL++RL VI +H
Sbjct: 249 TQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLESLVQAGKFREDLFHRLNVIRIH 308

Query: 300 LPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNV 359
           +P L  R +D+  +A   L   ++E   +   L  E  E  R   WPGNVRQ++N  R +
Sbjct: 309 IPRLADRREDIPALARHFLARAAQELAVEPKILKPETEEFIRNLPWPGNVRQMENTCRWI 368

Query: 360 VVLNEGREITLDMLPPPLNQM---SAPI---NRAL------PLAHENKVSVHEIFPLWMT 407
            V+   RE+ +  LPP L  +   +AP+    +AL       LA      +    P +  
Sbjct: 369 TVMASSREVLIGDLPPELLNLPHDAAPVTNWEQALRQWADQALARGQTSLLDSAVPSF-- 426

Query: 408 EKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
           E+  IE A++   G    AA  L    +T+ RK++
Sbjct: 427 ERIMIETALKHTAGRRRDAALLLGWGRNTLTRKIK 461