Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  285 bits (729), Expect = 2e-81
 Identities = 166/457 (36%), Positives = 256/457 (56%), Gaps = 15/457 (3%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +++D  +   + + YL     ++    T  D +  +     DLIL D RLPD  G+++L 
Sbjct: 6   LIDDDPAFCLMLKGYLKRQQYEVETAYTANDGLRVLKASSFDLILTDFRLPDKDGLELLS 65

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAI-RKASKLK 119
            ++  + +VP++ MT +  I TAV A++ GA +++ KP   D   + + NA+ RKA   +
Sbjct: 66  QIRVLTQEVPVILMTTYADIRTAVRAIKMGAFEYITKPINPDETLLVIKNALNRKAEAEQ 125

Query: 120 NDVDNKNQNYQGFI-GSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASK 178
             V   +     F+ G S   + +   I   A +  S+ I GESGTGKE  A  IH  SK
Sbjct: 126 EAVSTASAGSFQFVRGQSPQAEQIEEFISLVAPTNLSVIIEGESGTGKEYVARMIHEQSK 185

Query: 179 RGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDL 238
           R D+PF+AI+C A+ K+L  SELFG+VKGAFTGA  +++G  EAA+GGTLFLDE+  +  
Sbjct: 186 RHDRPFVAIDCGALSKELAGSELFGYVKGAFTGALQDKRGQFEAAEGGTLFLDEIGNLPY 245

Query: 239 DLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPL 298
           ++Q KLLR +Q    +K+GS+  ++VDVR + ATN D  + V  G+FREDLY+RL    +
Sbjct: 246 EVQVKLLRALQERKVRKLGSTTDQNVDVRVLAATNEDLVQAVANGQFREDLYHRLNEFKI 305

Query: 299 HLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRN 358
           +LPPLR R  DV+  A   L   ++E  K      A   +   +Y WPGN+R+L+NV++ 
Sbjct: 306 NLPPLRDRDGDVVLFANHFLQQANRELEKAVQGFDAATEDAMLRYNWPGNLRELKNVVKR 365

Query: 359 VVVLNEGREITLDMLP-------PPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQA 411
            V+L +   +TL  LP       P   Q S   +   P+  + K S++E      TE++ 
Sbjct: 366 AVLLAKSEFVTLQELPAEIVHYTPAPQQASVAYSPHDPMETDLK-SINE-----RTEREM 419

Query: 412 IEQAIEACDGNIPRAATYLDVSPSTIYRKLQTWNEKV 448
           I   +E    N  +AA  L++   T+Y KL+ +N ++
Sbjct: 420 ILAMLERVKYNKSKAARLLNIDRKTLYNKLKLYNIEI 456