Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  278 bits (711), Expect = 3e-79
 Identities = 156/410 (38%), Positives = 241/410 (58%), Gaps = 16/410 (3%)

Query: 40  EPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPC 99
           E +++L D++LPD  G+++L  VKEK P   ++ MTA G+I   V AM+ GA D+L K  
Sbjct: 50  EVEVVLSDVKLPDDHGLNILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGE 109

Query: 100 EADRLRVTVNNAIRKASKLKNDVDNKNQNYQGF-----IGSSQTMQAVYRTIDSAASSKA 154
             ++L VTV  A  KA   K   + + Q    F     IG +  ++         A++ +
Sbjct: 110 NDEQLIVTVARAADKARLRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDS 169

Query: 155 SIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAAT 214
           ++ + GE+G GKE+ A+AIH+AS R  KPF+A+NC+A PKDL+ESE+FG+ KGAFTGA  
Sbjct: 170 TVLLEGETGVGKELFAQAIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMA 229

Query: 215 ERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNR 274
           +++G  E A+GGT+FLDE+ EM  +LQ K LR ++T +F K+G +K   V+VR V ATNR
Sbjct: 230 DKKGLFEEANGGTIFLDEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNR 289

Query: 275 DPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSA 334
           D   E +  RFR DLYYRL V  + +P LR R  D+  +A   L   + +  +    +S 
Sbjct: 290 DLQAEAEADRFRPDLYYRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSE 349

Query: 335 EVVERFRQYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPLAHEN 394
           E +++ + Y W GN+R+L+NV+   V+L +  ++T + LP      +  +      A E+
Sbjct: 350 EFIQKLKHYPWKGNIRELKNVMERAVILADEEKLTPEHLPAEFWTAAPSLE-----ASES 404

Query: 395 KVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTW 444
             S+  +      E++ I + +E  DGN   AA  L +  +T+YRK+Q +
Sbjct: 405 DTSLSTV------ERKHIMKILEQTDGNKTEAARRLHIGLTTLYRKVQEY 448