Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  278 bits (710), Expect = 3e-79
 Identities = 163/439 (37%), Positives = 257/439 (58%), Gaps = 24/439 (5%)

Query: 12  YRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPI 71
           Y   L P D ++    + +D + ++ +R P+++ LD  LPD  G +VL  +KE +PD  +
Sbjct: 23  YHLSLNP-DYELKKFHSAKDCLSNMHQR-PNVVTLDYSLPDKNGAEVLKKIKELNPDTQV 80

Query: 72  VFMTAHGSIDTAVEAMRHGAQDFLIKPCEA-DRLRVTVNNAIRKASKLKNDVDNKNQ--- 127
           V ++    + TAV+ ++ GA D+++K  +  +RL  T+N  IR+   L+ ++D   +   
Sbjct: 81  VVISGQEDVATAVDLLKKGAYDYIVKDEDTPERLWNTINK-IRENVSLREEIDQLREEIV 139

Query: 128 ---NYQGFI-GSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKP 183
              ++  FI G+S  M+ V+  +D AA +  ++ I GE+GTGKE+ A+AIH    +  KP
Sbjct: 140 QKYDFSNFIIGNSDAMKRVFVMMDKAAKTNITVSINGETGTGKELVAKAIHYNGPKNKKP 199

Query: 184 FIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTK 243
           ++A+N AAIP++LIESELFGH KGAFTGA + R G  E A+ GT+FLDE+ E+D+ LQ K
Sbjct: 200 YVAVNVAAIPRELIESELFGHEKGAFTGAVSRRLGKFEEANKGTIFLDEIGELDISLQAK 259

Query: 244 LLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPL 303
           LLR +Q     +VG + +  +D R + AT+++   EV++G FREDLYYRL  +P+ LPPL
Sbjct: 260 LLRVLQEKEITRVGGNTVVPIDTRIIVATHKNLADEVKKGNFREDLYYRLLGLPIELPPL 319

Query: 304 RARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVVVLN 363
           R RG D++ +A   +   +KE G     LSAE  E+   + +PGNVR+L+ V+   VV+ 
Sbjct: 320 RDRGADILVLAKFFMDAFAKENGMGRKTLSAEAQEKLLAHPYPGNVRELRAVVELAVVMA 379

Query: 364 EGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACDGNI 423
           +  EI  + +      ++A  N    LA E  +  +            I++ +   D N+
Sbjct: 380 DDDEIKANDV-----NLAANNNEKDFLATERSLREY--------TTDIIQRFLNKYDNNV 426

Query: 424 PRAATYLDVSPSTIYRKLQ 442
              A  LD+  STIYR +Q
Sbjct: 427 LLVADKLDIGKSTIYRMIQ 445