Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  280 bits (716), Expect = 7e-80
 Identities = 152/412 (36%), Positives = 234/412 (56%), Gaps = 17/412 (4%)

Query: 42  DLILLDLRLP-----DMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLI 96
           D++LLD+           G   L  + + SP   ++ MTA+G I+ AV+A++ GA DF++
Sbjct: 51  DVVLLDMNYSTGATSSKEGFHWLKQILQLSPKTTVILMTAYGDIELAVKALKEGASDFVL 110

Query: 97  KPCEADRLRVTVNNA------IRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAA 150
           KP + D+L   +  A      + K S  K + +N   +Y GFIG S  MQ VY+T+D  A
Sbjct: 111 KPWQNDKLVAILKTACQNRSGVSKRSAEKTEQENTAYHYDGFIGVSPAMQRVYQTLDKVA 170

Query: 151 SSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFT 210
           ++ A++ I GE+GTGKEV A A+H  SKR    F  ++  A+ + L ESELFGH KGAFT
Sbjct: 171 ATDANVLILGENGTGKEVAARALHRKSKRAGSVFEKVDLGAVSETLFESELFGHAKGAFT 230

Query: 211 GAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVC 270
            A  ER G  EAA GGTLFLDE+  +   LQ KLL  +Q+    ++G++K + +D+R VC
Sbjct: 231 DAKEERAGRLEAASGGTLFLDEIGNLSPALQAKLLTVLQSRQVIRLGTNKPRPIDIRLVC 290

Query: 271 ATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFV 330
           ATN   ++ V+EG FR+DL YR+  + +HLPPLR R +D+  +A   L    ++ G+  +
Sbjct: 291 ATNMPLYEMVREGSFRQDLLYRINTVEIHLPPLRERREDIKLLADHFLKVYRQKYGRPQL 350

Query: 331 RLSAEVVERFRQYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPL 390
            L A+ + R  +Y WPGN+R+L + +   V+L +G E+       P +   AP       
Sbjct: 351 HLGADTMRRLNEYHWPGNIRELDHAMERAVILCDGNEL------HPDDFYFAPSENGQQK 404

Query: 391 AHENKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
               +      + L   EK  +++A+    GNI  AA  L ++ + +YR+++
Sbjct: 405 KQGLESITESDYTLEALEKMMVQKALVKHSGNITHAAKELGITRTALYRRIE 456