Pairwise Alignments
Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 476 a.a., Nitrogen regulation protein NR(I) from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 312 bits (800), Expect = 1e-89
Identities = 186/463 (40%), Positives = 265/463 (57%), Gaps = 22/463 (4%)
Query: 1 MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
+V+D +A+ + + + T RDA + + + PDL+LLDLRLPD +GMD L+
Sbjct: 6 IVDDDVDASAMLGELIAMQGLTVATANTLRDARKQLALQPPDLVLLDLRLPDGSGMD-LF 64
Query: 61 AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
A E + +V +T H S++T++ A+R GA D+++KP +L+ ++ + K S K
Sbjct: 65 ADPELLANSEVVLLTGHASLETSILALRLGAVDYIVKPITPKQLQGVLSR-VSKPSVFKA 123
Query: 121 DVDN------KNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIH 174
+V ++ G S +M VY I A + S+FITGESGTGKEV A+ IH
Sbjct: 124 EVAGLTASVASTGHFGQLWGRSPSMLQVYEQITRVAGTGVSVFITGESGTGKEVVAQTIH 183
Query: 175 AASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELC 234
S+R PFI +NC AI +LIESELFGH KG+FTGA + QG E A GGTLFLDE+
Sbjct: 184 ELSRRRKMPFIGVNCGAISPNLIESELFGHEKGSFTGADRQHQGFFERAAGGTLFLDEIT 243
Query: 235 EMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLY 294
EM LDLQ KLLR ++TG F +VG+++ + DVR + ATNR P + V +GR R DL YRL
Sbjct: 244 EMPLDLQVKLLRVLETGRFLRVGATQSQETDVRIIAATNRQPMQAVADGRLRTDLMYRLN 303
Query: 295 VIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQN 354
V P+ LPPLR R DDV +A L + ++EGK+ R S E +ER Y WPGNVR+L+N
Sbjct: 304 VFPIDLPPLRERLDDVPLLANRFLRLIGEQEGKE-KRFSPEALERLAAYAWPGNVRELRN 362
Query: 355 VLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPLAH-ENKVSVHE--------IFPLW 405
++ V+ G+ I LP + AP A P+A E ++ + + PL
Sbjct: 363 AVQRAYVMTAGQTIAAQWLPGAADPPGAPATVAAPVAPVETALAAPDARHPEGSVVLPLG 422
Query: 406 MTEKQAIEQAIEAC----DGNIPRAATYLDVSPSTIYRKLQTW 444
++ QA + I A R A L +S T+Y +L+ +
Sbjct: 423 ISLAQAEQTLILATLQHYGRQKERTAAALGISLKTLYNRLKQY 465