Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Nitrogen regulation protein NR(I) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  312 bits (800), Expect = 1e-89
 Identities = 186/463 (40%), Positives = 265/463 (57%), Gaps = 22/463 (4%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D    +A+    +    + +    T RDA + +  + PDL+LLDLRLPD +GMD L+
Sbjct: 6   IVDDDVDASAMLGELIAMQGLTVATANTLRDARKQLALQPPDLVLLDLRLPDGSGMD-LF 64

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
           A  E   +  +V +T H S++T++ A+R GA D+++KP    +L+  ++  + K S  K 
Sbjct: 65  ADPELLANSEVVLLTGHASLETSILALRLGAVDYIVKPITPKQLQGVLSR-VSKPSVFKA 123

Query: 121 DVDN------KNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIH 174
           +V           ++    G S +M  VY  I   A +  S+FITGESGTGKEV A+ IH
Sbjct: 124 EVAGLTASVASTGHFGQLWGRSPSMLQVYEQITRVAGTGVSVFITGESGTGKEVVAQTIH 183

Query: 175 AASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELC 234
             S+R   PFI +NC AI  +LIESELFGH KG+FTGA  + QG  E A GGTLFLDE+ 
Sbjct: 184 ELSRRRKMPFIGVNCGAISPNLIESELFGHEKGSFTGADRQHQGFFERAAGGTLFLDEIT 243

Query: 235 EMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLY 294
           EM LDLQ KLLR ++TG F +VG+++ +  DVR + ATNR P + V +GR R DL YRL 
Sbjct: 244 EMPLDLQVKLLRVLETGRFLRVGATQSQETDVRIIAATNRQPMQAVADGRLRTDLMYRLN 303

Query: 295 VIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQN 354
           V P+ LPPLR R DDV  +A   L  + ++EGK+  R S E +ER   Y WPGNVR+L+N
Sbjct: 304 VFPIDLPPLRERLDDVPLLANRFLRLIGEQEGKE-KRFSPEALERLAAYAWPGNVRELRN 362

Query: 355 VLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPLAH-ENKVSVHE--------IFPLW 405
            ++   V+  G+ I    LP   +   AP   A P+A  E  ++  +        + PL 
Sbjct: 363 AVQRAYVMTAGQTIAAQWLPGAADPPGAPATVAAPVAPVETALAAPDARHPEGSVVLPLG 422

Query: 406 MTEKQAIEQAIEAC----DGNIPRAATYLDVSPSTIYRKLQTW 444
           ++  QA +  I A          R A  L +S  T+Y +L+ +
Sbjct: 423 ISLAQAEQTLILATLQHYGRQKERTAAALGISLKTLYNRLKQY 465