Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Response regulator of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  305 bits (781), Expect = 2e-87
 Identities = 173/441 (39%), Positives = 258/441 (58%), Gaps = 11/441 (2%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  S   + ++ L     ++ +  +G DA+  +  +  DL+L D+R+ +M G+  L 
Sbjct: 10  VVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKVFDLVLCDVRMAEMDGIATLK 69

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +K  +P +PI+ MTA  S++TAVEA++ GA D+LIKP + DRL+ T+  A+    +   
Sbjct: 70  EIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLEKALAHTRETGA 129

Query: 121 DVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRG 180
           ++ + +    G IGSS  MQ +   I   A S A++ I G+SGTGKE+ A A+HA S R 
Sbjct: 130 ELPSASAAQFGMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARS 189

Query: 181 DKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDL 240
           D+P + +NCAA+ + L+ESELFGH KGAFTGA   R+G    ADGGTLFLDE+ ++   +
Sbjct: 190 DRPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLM 249

Query: 241 QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHL 300
           Q +LLR IQ    Q+VGS++  SVDVR + AT+RD  +EV  GRFR+DLYYRL V+ + +
Sbjct: 250 QVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEM 309

Query: 301 PPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVV 360
           P LR R +D+  +A   L   ++   K     + + ++    Y+WPGN+R+L+N +   V
Sbjct: 310 PSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAV 369

Query: 361 VLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACD 420
           VL  G  I+   LP  +         A P+  E      EI PL   EK+ I  A+E   
Sbjct: 370 VLLTGEYISERELPLAI--------AATPIKTEYS---GEIQPLVDVEKEVILAALEKTG 418

Query: 421 GNIPRAATYLDVSPSTIYRKL 441
           GN   AA  L ++  T+  KL
Sbjct: 419 GNKTEAARQLGITRKTLLAKL 439