Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC62

 Score =  306 bits (783), Expect = 1e-87
 Identities = 167/441 (37%), Positives = 256/441 (58%), Gaps = 11/441 (2%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D  S   + ++ L     ++ +  +GR A+E +  +  DL+L D+R+ +M G+  L 
Sbjct: 10  VVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLK 69

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +K  +P +P++ MTA+ S++TAVEA++ GA D+LIKP + D L+ T+  A+     +  
Sbjct: 70  EIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDA 129

Query: 121 DVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRG 180
           +      +  G +G S  MQ +   I   A S+A++ I G+SGTGKE+ A AIHA+S R 
Sbjct: 130 ETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARS 189

Query: 181 DKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDL 240
           +KP + +NCAA+ + L+ESELFGH KGAFTGA   R+G    ADGGTLFLDE+ ++   +
Sbjct: 190 EKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMM 249

Query: 241 QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHL 300
           Q +LLR IQ    Q+VGS++  SVDVR + AT+RD   EV  GRFR+DLYYRL V+ + +
Sbjct: 250 QVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEV 309

Query: 301 PPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVV 360
           P LR R +D+  +    L   ++   K     + + ++    Y+WPGN+R+L+N +   V
Sbjct: 310 PSLRQRREDIPLLVGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAV 369

Query: 361 VLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACD 420
           VL  G  I+   LP  +     P+ ++            +I PL   EK+ I  A+E   
Sbjct: 370 VLLTGEYISERELPLAIASTPIPLGQS-----------QDIQPLVEVEKEVILAALEKTG 418

Query: 421 GNIPRAATYLDVSPSTIYRKL 441
           GN   AA  L ++  T+  KL
Sbjct: 419 GNKTEAARQLGITRKTLLAKL 439