Pairwise Alignments

Query, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., nitrogen regulation protein NR(I) from Dickeya dianthicola ME23

 Score =  308 bits (789), Expect = 2e-88
 Identities = 184/464 (39%), Positives = 262/464 (56%), Gaps = 28/464 (6%)

Query: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60
           +V+D +S+  +    LT   +       G  A+ ++  + PD++L D+R+P M G+ +L 
Sbjct: 8   IVDDDSSIRWVLERALTGAGLTCATFDNGTQALNALTTQTPDVLLSDIRMPGMDGLALLQ 67

Query: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKN 120
            +K++ P +P++ MTAH  +D AV A + GA D+L KP + D     V  AI  +  ++ 
Sbjct: 68  QIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI--SHYMEQ 125

Query: 121 DVDNKNQNYQG----FIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAA 176
               ++Q   G     IG +  MQ V+R I   + S  S+ I GESGTGKE+ A A+H  
Sbjct: 126 QQPARSQPISGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRH 185

Query: 177 SKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEM 236
           S R   PFIA+N AAIPKDLIESELFGH KGAFTGA   RQG  E ADGGTLFLDE+ +M
Sbjct: 186 SPRTKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGTLFLDEIGDM 245

Query: 237 DLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVI 296
            LD+QT+LLR +  G F +VG      VDVR + AT+++    VQEG+FREDL++RL VI
Sbjct: 246 PLDVQTRLLRVLADGQFYRVGGYAAVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVI 305

Query: 297 PLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVL 356
            +HLPPLR R +D+  +A   L   ++E G +   L  E      +  WPGNVRQL+N  
Sbjct: 306 RVHLPPLRERREDIPRLARYFLQATARELGVEPKNLHPETEAALTRLPWPGNVRQLENTC 365

Query: 357 RNVVVLNEGREITLDMLPPPLNQMSAP------------------INRALPLAHENKVSV 398
           R + V+  G+E+ +  LPP L + +AP                   +RAL   H+N ++ 
Sbjct: 366 RWLTVMAAGQEVLIQDLPPELFETTAPDATVHVMPDSWATLLAQWADRALRSGHQNLLA- 424

Query: 399 HEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442
            E  P    E+  +  A+    G+   AA  L    +T+ RKL+
Sbjct: 425 -EAQP--EMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLK 465