Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., excinuclease ABC subunit UvrB from Rhodanobacter sp000427505 FW510-R12

 Score =  909 bits (2350), Expect = 0.0
 Identities = 459/672 (68%), Positives = 553/672 (82%), Gaps = 2/672 (0%)

Query: 1   MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT 60
           M+  F+LV+ YQPAGDQP AI +L +G EAGLA QTLLGVTGSGKT+T+AN+I   QRPT
Sbjct: 1   MTDRFQLVAPYQPAGDQPQAIARLADGFEAGLAAQTLLGVTGSGKTYTIANMIERVQRPT 60

Query: 61  IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE 120
           I++APNKTLAAQLYGE + FFP+NAVEYFVSYYDYYQPEAYV  +DTFIEKD+S+N HIE
Sbjct: 61  IVMAPNKTLAAQLYGEFREFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDSSINEHIE 120

Query: 121 QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ 180
           QMRLSATKALL R+D++IVA+VSAIYGLG+P+ YL + L L  G+ I+QR ++ +L ELQ
Sbjct: 121 QMRLSATKALLSRRDSIIVATVSAIYGLGNPEDYLSLRLILATGERIDQRKLIHQLTELQ 180

Query: 181 YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA 240
           Y+RN+    RG +RVRGE++D+FPAES+ EA+R+E+FD E+E ++LFDPLTG  T R + 
Sbjct: 181 YTRNETELRRGTYRVRGEIVDVFPAESETEALRIELFDGEVEKMALFDPLTGE-TIRKVQ 239

Query: 241 RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE 300
           R+T+YP+THY + RE +L AIE IK EL+ R +YL   NKL+E QR+ QRT+FD+EMM E
Sbjct: 240 RYTVYPRTHYASTRESVLNAIETIKLELKDRLEYLYKENKLVEAQRLEQRTRFDLEMMAE 299

Query: 301 LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE 360
           +G+C GIENYSR+L+ RA GEPPPTLFDYLP DGLL++DESHVTVPQ+GAM+KGDRSRKE
Sbjct: 300 VGYCQGIENYSRHLTRRAPGEPPPTLFDYLPADGLLVVDESHVTVPQLGAMYKGDRSRKE 359

Query: 361 TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL 420
           TLVEFGFRLPSA+DNRPL+F+E+E   P+ I+VSATP +YEL KSG  V E VVRPTGL+
Sbjct: 360 TLVEFGFRLPSAMDNRPLRFEEWEERVPRAIYVSATPRDYELHKSGDAVTELVVRPTGLV 419

Query: 421 DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480
           DP +EVRPV TQVDDLLSE   R A  +R+LVTTLTKRMAE+LTEYL EH VKVRYLHSD
Sbjct: 420 DPEVEVRPVRTQVDDLLSEVHKRVALGDRVLVTTLTKRMAENLTEYLAEHDVKVRYLHSD 479

Query: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540
           I+TVER EIIRDLRLG FDVLVGINLLREGLDMPEV+LVA+LDADKEGFLRS  SLIQT+
Sbjct: 480 IETVERSEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSTGSLIQTI 539

Query: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIME- 599
           GRAARNV GKAILYAD++T+SM+ A+DET RRREKQ+ +NE  GITP+ + R + DIME 
Sbjct: 540 GRAARNVRGKAILYADNVTRSMQAAMDETARRREKQVVFNEAHGITPKTVVRRIADIMEG 599

Query: 600 LGDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAA 659
               A +R+   S     A VAE +A Y  L+PQQ    I KLEA MY+HAQNLEFE AA
Sbjct: 600 ARSEAGNRRGGKSSTRGRAAVAEPAAEYAGLSPQQAAGAIRKLEAQMYKHAQNLEFEDAA 659

Query: 660 QKRDEIHQLRQQ 671
           + RD+IHQLR+Q
Sbjct: 660 RLRDQIHQLREQ 671