Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 675 a.a., excinuclease ABC subunit B from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  707 bits (1826), Expect = 0.0
 Identities = 362/668 (54%), Positives = 479/668 (71%), Gaps = 4/668 (0%)

Query: 5   FELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTIILA 64
           F+L S++QP GDQP AI QL EG+  G   Q LLG TG+GKTFT+ANVI    +PT++L 
Sbjct: 3   FKLTSEFQPTGDQPKAIAQLTEGINKGEPSQVLLGATGTGKTFTMANVIKNTGKPTLVLC 62

Query: 65  PNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQMRL 124
            NKTLAAQLYGE K FFP+NAVEYF+SYYDYYQPEAY+ + D FIEKD ++N  IE++RL
Sbjct: 63  HNKTLAAQLYGEFKQFFPDNAVEYFISYYDYYQPEAYIASNDVFIEKDMAINEEIEKLRL 122

Query: 125 SATKALLE-RKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYSR 183
             T ALL  R+D V+VASVS IYG+G+P+ + K +L+L  G   ++ ++L    ++ YSR
Sbjct: 123 HTTSALLSGRRDVVVVASVSCIYGIGNPEEFGKNVLYLAPGQRYSRNNLLYTFVQILYSR 182

Query: 184 NDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARFT 243
            +  F RG FRV+G+ +DIFPA +D  A R+  F DE+E I   DP +G   S + A  T
Sbjct: 183 TEAEFTRGTFRVKGDTVDIFPAYADF-AYRLYFFGDELEAIHRIDPESGKKLSDEKA-VT 240

Query: 244 IYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELGF 303
           +YP   +VT +E + +AI +I+ ++  + +Y L  ++  E +RI +RT+FD+EM+ ELG+
Sbjct: 241 LYPANLFVTGKETLNQAIHEIQYDMVAQHEYFLKEDRPTEAKRIKERTEFDLEMIRELGY 300

Query: 304 CSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLV 363
           CSGIENYSRY   RA G  P  L DY P D L++IDESHVTVPQ+ AM+ GDRSRK  LV
Sbjct: 301 CSGIENYSRYFDRRAPGSRPFCLLDYFPDDFLMVIDESHVTVPQVRAMWGGDRSRKVALV 360

Query: 364 EFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDPI 423
           E+GFRLP+A+DNRPL F+EFE+L  Q +FVSATP +YE+ KS G + EQ++RPTGLLDP 
Sbjct: 361 EYGFRLPAAMDNRPLTFNEFESLMHQVVFVSATPGDYEIQKSEGVIVEQIIRPTGLLDPE 420

Query: 424 IEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDIDT 483
           IE+RP   QVDDLL E   R     R+LVTTLTKRM+E+L +YL    +KV+YLHS++ T
Sbjct: 421 IEIRPSTNQVDDLLDEIDERVKEGARVLVTTLTKRMSEELAKYLERLNIKVKYLHSEVKT 480

Query: 484 VERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGRA 543
           ++RVEI+R+LRLGV DVL+G+NLLREGLD+PEV+LVAILDADKEGFLR +RSLIQTMGRA
Sbjct: 481 LDRVEILRELRLGVIDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRDQRSLIQTMGRA 540

Query: 544 ARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMELGDI 603
           ARN  GK I+YAD +T SM++AIDET RRR  Q+AYNE+ GI P+ + ++  +I     +
Sbjct: 541 ARNEKGKVIMYADRMTDSMQRAIDETNRRRATQMAYNEEHGIVPRTILKTSDEIHGQTSV 600

Query: 604 AKSRKQKNSKVVPLAKVA-EESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQKR 662
           A S+K++        +V+       Q +   +LEK I K E  M   A++L+F  AA+ R
Sbjct: 601 ADSKKKEVKMYTGPEEVSIAAEPIIQTMKRDELEKLIKKTEKQMEAAAKDLDFLQAAKYR 660

Query: 663 DEIHQLRQ 670
           DE+  LR+
Sbjct: 661 DELADLRK 668