Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 1123 a.a., transcription-repair coupling factor from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 52.4 bits (124), Expect = 1e-10
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 153 SYLKMMLHLRRGDVINQRDMLRRLAELQYSRNDMAFERGQFRVRGEVIDIFPAESDQEAV 212
           S ++  L  + G+ ++   +   LAE  + R +  +E GQ+ VRG ++D++   +D    
Sbjct: 140 SLVENTLGAKIGEKLDTTFLSEMLAEYGFERTEFVYEAGQYAVRGGIVDVYSYANDL-PY 198

Query: 213 RVEMFDDEIECISLFDPLT 231
           R+E+F DEIE I  FDP T
Sbjct: 199 RIELFGDEIESIRTFDPDT 217



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 468 HEHGVKVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKE 527
           H    KV Y H  ++  +  + +     G +DVLV  N++  GLD+     + I  A   
Sbjct: 793 HVPDCKVTYAHGQMEPEKLEKRMMKFVNGEYDVLVSTNIIESGLDIENANTIIINRAHMF 852

Query: 528 GFLRSERSLIQTMGRAARNVNGKAILY 554
           G       L Q  GR  R+ N KA  Y
Sbjct: 853 GL----SDLHQMRGRVGRS-NKKAYCY 874