Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 58.9 bits (141), Expect = 7e-13
 Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 28/286 (9%)

Query: 389 QTIFVSATPSE--YELTKSGG------EVAEQVVRPTGLLDPIIEVRPVATQVDDLLSEA 440
           QTIF SAT S+   E+TK         +V  Q +  T +     EVR  A Q  ++LS  
Sbjct: 180 QTIFFSATMSKPIMEMTKRYQTDPVLVKVVHQELTVTNIDQAYFEVRNSAKQ--EVLSRL 237

Query: 441 RIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDIDTVERVEIIRDLRLGVFDV 500
            +   N +  ++   TKRM +DL   L   G     LH D++  +R  ++   R G  ++
Sbjct: 238 -LDMYNLKSAIIFCNTKRMVDDLVTGLQARGYFSDALHGDLNQNQRSAVMNKFRNGTLEI 296

Query: 501 LVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGRAAR-NVNGKAILYADSIT 559
           LV  ++   GLD+  V  V   D  ++     E S +  +GR  R   +GKA  +    +
Sbjct: 297 LVATDVAARGLDVENVEAVFNYDLPQD-----EESYVHRIGRTGRAGKSGKAFSFVGGRS 351

Query: 560 KSMR-KAIDETERRR---EKQLAYNEQRGITPQPLKRSVKDIMELGDIAKSRKQKNSKVV 615
              + K I    + +   ++  +  +   I        VK+++E G +AK        V 
Sbjct: 352 DGYKLKDIMRYTKAKIVLQQVPSLEDVNEIRTNMFFDKVKEVLEKGHLAK-------HVA 404

Query: 616 PLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQK 661
            + +   E+  Y  L       ++S  EA + +   + E  L+A K
Sbjct: 405 RIERFVNETDGYTPLDVASALLKMSMKEAKVKEKGADAEKGLSAAK 450