Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., excinuclease ABC subunit UvrB from Pantoea agglomerans CFBP13505 P0401

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 515/676 (76%), Positives = 585/676 (86%), Gaps = 3/676 (0%)

Query: 1   MSKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPT 60
           MSKAF+L S ++P+GDQP AI++L EGLE GLAHQTLLGVTGSGKTFT+ANVIA   RPT
Sbjct: 1   MSKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT 60

Query: 61  IILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE 120
           ++LAPNKTLAAQLYGEMK FFP+NAVE+FVSYYDYYQPEAYVP++DTFIEKDASVN HIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ 180
           QMRLSATKALLER+D ++VASVSAIYGLGDPD YLKMMLHL RG +I+QR +LRRL+ELQ
Sbjct: 121 QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ 180

Query: 181 YSRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLA 240
           Y+RND AF+RG FRVRGEVIDIFPAESD  A+RVE+FD+E+E +SLFDPLTG I S  + 
Sbjct: 181 YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSV-VP 239

Query: 241 RFTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNE 300
           RFTIYPKTHYVTPRERIL+A+E IK EL  RR+ LL+NNKLLEEQRI+QRTQFD+EMM+E
Sbjct: 240 RFTIYPKTHYVTPRERILQAMEDIKVELADRRRMLLENNKLLEEQRITQRTQFDLEMMSE 299

Query: 301 LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKE 360
           LG+CSGIENYSRYLS R  GE PPTLFDYLP DGLL++DESHVT+PQIG M+KGDR+RKE
Sbjct: 300 LGYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKE 359

Query: 361 TLVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLL 420
           TLVE+GFRLPSALDNRP+KF+EFEALAPQTI+VSATP +YEL KSG EV +QVVRPTGLL
Sbjct: 360 TLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVIDQVVRPTGLL 419

Query: 421 DPIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480
           DPIIEVRPV TQVDDLLSE R R A +ER+LVT LTKRMAEDLTEYL EHG KVRYLHSD
Sbjct: 420 DPIIEVRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLSEHGEKVRYLHSD 479

Query: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540
           IDTVER+EIIRDLRLG FDVLVGINLLREGLDMPEV+LVAILDADKEGFLRSERSLIQT+
Sbjct: 480 IDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 539

Query: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL 600
           GRAARN+NGKAILY D IT SM +AI+ETERRREKQ  +NE+ GI PQ L + + DI+EL
Sbjct: 540 GRAARNINGKAILYGDKITPSMARAIEETERRREKQQLHNEENGIVPQGLNKKITDILEL 599

Query: 601 GDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQ 660
           G      + K     P    A+  A +Q+LTPQ L+K+I +LE  M QHAQNLEFE AA 
Sbjct: 600 GKNVVKTRGKAKPARP--GEAQALADFQLLTPQALQKKIHELEGQMQQHAQNLEFEQAAN 657

Query: 661 KRDEIHQLRQQFIANS 676
            RD++H+LR  FIA S
Sbjct: 658 VRDQLHELRTLFIAAS 673