Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

 Score =  786 bits (2031), Expect = 0.0
 Identities = 399/664 (60%), Positives = 503/664 (75%), Gaps = 12/664 (1%)

Query: 5   FELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTIILA 64
           F++VSDYQPAGDQP AI +L  G++A    Q LLGVTGSGKTFT+A+VIA  +RP ++LA
Sbjct: 22  FKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIARTRRPALVLA 81

Query: 65  PNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQMRL 124
           PNKTLAAQLY EMK FFP+NAVEYFVSYYDYYQPEAY+P TDT+IEKD++VN  I++MR 
Sbjct: 82  PNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSAVNEQIDRMRH 141

Query: 125 SATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYSRN 184
           +AT+ALLER+D ++VASVS IYG+G  +SY +M + L+ G+ I++ D+L+RL ELQY+RN
Sbjct: 142 AATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLKRLVELQYTRN 201

Query: 185 DMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARFTI 244
           D AFERG FRVRG+ ++IFP   +  A R+ +F DEIE I+ FDPLTG  T   L+  T+
Sbjct: 202 DAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEKTC-SLSEVTV 260

Query: 245 YPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELGFC 304
           YP +HYVTPR  I +AI+ IK+EL+   +      KLLE QR+ QRT FD+EM+   G C
Sbjct: 261 YPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDLEMLETTGHC 320

Query: 305 SGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLVE 364
             IENYSRYL+GR  G+PPPTLF+YLP D LLI+DESHVTVPQIG M++GD +RK  L E
Sbjct: 321 KSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGDFNRKSVLAE 380

Query: 365 FGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDPII 424
           FGFRLPS +DNRPLKF+E+E + PQT++VSATP  +E+ ++GG   EQV+RPTGL+DP+ 
Sbjct: 381 FGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIRPTGLIDPVC 440

Query: 425 EVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDIDTV 484
            VRPV  QVDDLL E R  A    R LVTTLTKRMAEDLTEY+H++GV+VRYLHSDIDT+
Sbjct: 441 IVRPVEHQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNGVRVRYLHSDIDTL 500

Query: 485 ERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMGRAA 544
           ER+EIIRDLRLG FDVL+GINLLREGLD+PE ALVAILDADKEGFLRS+ SLIQT+GRAA
Sbjct: 501 ERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLIQTIGRAA 560

Query: 545 RNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMELGDIA 604
           RN++G+ ILYAD +T S+  A+ ET RRREKQ AYN   GITP+ ++++V D+M+     
Sbjct: 561 RNIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIRKAVSDVMD----- 615

Query: 605 KSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQKRDE 664
                  +  V +    +   A+ V     L    + +E  M   A +LEFE AA+ RDE
Sbjct: 616 ---SVYEADYVTVG-TGDSGLAHGV--GHNLASVKADIEKRMKAAAADLEFEEAARLRDE 669

Query: 665 IHQL 668
           + +L
Sbjct: 670 LRRL 673