Pairwise Alignments

Query, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., UvrABC system protein B from Acinetobacter radioresistens SK82

 Score =  876 bits (2264), Expect = 0.0
 Identities = 437/672 (65%), Positives = 552/672 (82%), Gaps = 3/672 (0%)

Query: 2   SKAFELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTI 61
           S+ FELV+ Y PAGDQP AI++L++G++ G   Q LLGVTGSGKT+T+ANVIA  QRPTI
Sbjct: 4   SRPFELVTQYAPAGDQPQAIEKLVKGIQQGYKSQLLLGVTGSGKTYTMANVIAQTQRPTI 63

Query: 62  ILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQ 121
           ++A NKTLAAQLYGE KAFFPNNAVEYFVSYYDYYQPEAYVP++DTFIEKDA++N HI+Q
Sbjct: 64  VMAHNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAINDHIDQ 123

Query: 122 MRLSATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQY 181
           MRLSAT++LLER+DA+IVASVSAIYGLGDP++Y+KM+LH+ +GD + + D++RRL E+QY
Sbjct: 124 MRLSATRSLLERRDAIIVASVSAIYGLGDPEAYMKMLLHIVQGDRVGRDDIIRRLVEMQY 183

Query: 182 SRNDMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLAR 241
           +RN++ F RG +R+RGE++DIFPAES+Q A+R+E+FDDE++ I  FDPLTG +  R + R
Sbjct: 184 TRNELEFVRGTYRIRGEIMDIFPAESEQNAIRIELFDDEVDSIRWFDPLTGKML-RKVPR 242

Query: 242 FTIYPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNEL 301
            TIYPK+HYVTP++ ++ AI+ I+ EL+ + ++  +++KLLE QRI QRT++D+EMM +L
Sbjct: 243 VTIYPKSHYVTPKDNLVRAIDTIRDELKDQLKFFREHDKLLEAQRIEQRTRYDLEMMQQL 302

Query: 302 GFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKET 361
           G+ +GIENYSR+LSGR  G+ PPTLFDY+P D LLIIDESHVTVPQIGAM+KGDRSRKE 
Sbjct: 303 GYTNGIENYSRHLSGRRPGDAPPTLFDYVPDDALLIIDESHVTVPQIGAMYKGDRSRKEN 362

Query: 362 LVEFGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLD 421
           LV +GFRLPSALDNRP+KF+E+E + P T+FVSATP+ YEL KS  +V EQVVRPTGL+D
Sbjct: 363 LVNYGFRLPSALDNRPMKFEEWERIIPTTVFVSATPARYELEKS-EQVVEQVVRPTGLID 421

Query: 422 PIIEVRPVATQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSDI 481
           P IE+RPV TQVDD+LSE  IR   +ER+LVTTLTKRMAEDLT YL E+GVKV YLHSDI
Sbjct: 422 PEIEIRPVLTQVDDVLSEINIRKNLNERVLVTTLTKRMAEDLTAYLKEYGVKVAYLHSDI 481

Query: 482 DTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTMG 541
           DTVERV+II +LR GVFDVLVGINLLREGLDMPEV+LVAILDADKEGFLRSERSLIQT+G
Sbjct: 482 DTVERVKIIHELRTGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 541

Query: 542 RAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMELG 601
           RAARN+ GKAILYAD IT SM+KAIDETERRR KQ+ +NE  GI P+   R V   ++ G
Sbjct: 542 RAARNIKGKAILYADRITDSMQKAIDETERRRNKQIEFNELHGIIPRSAVRQVIKEIDTG 601

Query: 602 DIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQK 661
           ++  +  + + K+   A        + +  P+ L K ++KLE  M + ++ L+FE AA+ 
Sbjct: 602 EVL-AEDEIDEKITAQALSLTADERHILADPKLLSKHMAKLEKEMLKASKELQFEQAARL 660

Query: 662 RDEIHQLRQQFI 673
           RDEI +L+ Q +
Sbjct: 661 RDEILRLKAQML 672