Pairwise Alignments
Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056
Subject, 772 a.a., electron transport complex subunit RsxC from Escherichia coli ECRC98
Score = 687 bits (1774), Expect = 0.0
Identities = 389/777 (50%), Positives = 500/777 (64%), Gaps = 67/777 (8%)
Query: 28 MLSLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVK 87
ML L + K+WDF GGIHP E K QSN P+ + V+PLKQHIG G+L V
Sbjct: 1 MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVS 60
Query: 88 VGDRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWF 147
VGD+VL+GQPLT+ MLP+HAPTSG ++AI P + AHPS L+EL +++ D ++ W
Sbjct: 61 VGDKVLRGQPLTRGRGK-MLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWI 119
Query: 148 ELQPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYI 207
D++ E L+E I Q G++G+GGAGFPT KLQ G + E LIINAAECEPYI
Sbjct: 120 PRDGWADYRSRRREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYI 179
Query: 208 TADDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMV-IRVI 266
TADD LM+ A ++++GI I+ HIL+P+ +IGIEDNKP+A++ L+ D + +RVI
Sbjct: 180 TADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSHDISMRVI 239
Query: 267 PTKYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRRVVTL 326
PTKYPSGG KQL ILT +VP GG +DIG+++QNVG+ A+ RA++ GEP+ RVVTL
Sbjct: 240 PTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTL 299
Query: 327 TGDCFRKPRNVWALLGTPVQALLNEFGY--KADKKLPRLIMGGPMMGFTLPHAQVPITKT 384
TG+ +P NVWA LGTPV+ LLN+ G+ AD+ + IMGGP+MGFTLP VP+ K
Sbjct: 300 TGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMV---IMGGPLMGFTLPWLDVPVVKI 356
Query: 385 ANCILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELDLKDC 444
NC+LAP+ NEL E +CIRC CA+ACP LLPQQL W +K ++ DK ++ DC
Sbjct: 357 TNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADC 416
Query: 445 IECGACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKAEREN 504
IECGACA+VCPS IPLVQY+RQ KAEI E + A AKARFE ++AR+ER+KA R
Sbjct: 417 IECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLE 476
Query: 505 RFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQLEPTDNSVKPAIAAAIARAKAKQAE 564
R K AA + DAIAAA+ RVK ++AQ + +P + A
Sbjct: 477 RHKSAAVQPAAK-----DKDAIAAALARVKEKQAQ------ATQPIVIKA---------- 515
Query: 565 AAQSGASEPDNSEMAKLREERKRQARERKAQKGEVTEASTSDGADDKKSAVAAAIARAKA 624
PDNS + RE RK QAR ++A+ + +A+T D +K+AV AAIARAKA
Sbjct: 516 -----GERPDNSAIIAAREARKAQARAKQAELQQTNDAATV--TDPRKTAVEAAIARAKA 568
Query: 625 RKAEQQETESAAQPAQATPSSDDADPKKAAVAAAIARAKARKAEQQETESTAQPAQATPS 684
RK EQQ+ A+P Q DP+KAAV AAIARAKARK EQQ ++ A+P Q
Sbjct: 569 RKLEQQQAN--AEPEQ------QVDPRKAAVEAAIARAKARKLEQQ--QANAEPEQ---- 614
Query: 685 SDDADPKKAAVAAAIARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIARAKA 744
DP+KAAV AAIARAKARK E+Q+ A+P + DP+KAAV AAIARAKA
Sbjct: 615 --QVDPRKAAVEAAIARAKARKLEQQQAN--AEP------EEPVDPRKAAVEAAIARAKA 664
Query: 745 RKAEQQETESAAQPTQATPSSDDADPKKAAVAAAIARAKARKAAQQSSSNLNAEEKD 801
RK EQQ+ A+P + DP+KAAV AAI RAKARK QQ ++ E+ D
Sbjct: 665 RKLEQQQAN--AEP------EEPVDPRKAAVEAAITRAKARKLEQQQANAEPEEQVD 713
Score = 100 bits (249), Expect = 3e-25
Identities = 82/215 (38%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 467 AKAEIRTRSLEAEAAE-RAKARFEEKKARMERDKAERENR-FKQAAEDRRKEMQQQGGSD 524
A A + R LE + A + + + +KA +E A + R +Q + E Q
Sbjct: 562 AIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKLEQQQANAEPEQQVDPRKA 621
Query: 525 AIAAAIERVKAQK-----AQLEPTD--NSVKPAIAAAIARAKAKQAEAAQSGASEPDNSE 577
A+ AAI R KA+K A EP + + K A+ AAIARAKA++ E Q+ A + +
Sbjct: 622 AVEAAIARAKARKLEQQQANAEPEEPVDPRKAAVEAAIARAKARKLEQQQANAEPEEPVD 681
Query: 578 MAKLREERK-RQARERKAQKGEVTEASTSDGADDKKSAVAAAIARAKARKAEQQETESAA 636
K E +A+ RK ++ + A + D +K+AVAAAIARAKARK EQQ+
Sbjct: 682 PRKAAVEAAITRAKARKLEQQQAN-AEPEEQVDPRKAAVAAAIARAKARKLEQQQ----- 735
Query: 637 QPAQATPSSDDADPKKAAVAAAIARAKARKAEQQE 671
A A P + DP+KAAVAAAIAR +A+KA QQ+
Sbjct: 736 --ANAEPE-EQVDPRKAAVAAAIARVQAKKAVQQK 767