Pairwise Alignments

Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056

Subject, 740 a.a., SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex from Escherichia coli BL21

 Score =  695 bits (1794), Expect = 0.0
 Identities = 393/777 (50%), Positives = 503/777 (64%), Gaps = 67/777 (8%)

Query: 28  MLSLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVK 87
           ML L    +  K+WDF GGIHP E K QSN  P+    +    V+PLKQHIG  G+L V 
Sbjct: 1   MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVS 60

Query: 88  VGDRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWF 147
           VGD+VL+GQPLT+     MLP+HAPTSG ++AI P + AHPS L+EL +++  D ++ W 
Sbjct: 61  VGDKVLRGQPLTRGRGK-MLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWI 119

Query: 148 ELQPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYI 207
                 D++  + E L+E I Q G++G+GGAGFPT  KLQ G  + E LIINAAECEPYI
Sbjct: 120 PRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYI 179

Query: 208 TADDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMV-IRVI 266
           TADD LM+  A ++++GI I+ HIL+P+  +IGIEDNKP+A++ L+    D   + +RVI
Sbjct: 180 TADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSNDISLRVI 239

Query: 267 PTKYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRRVVTL 326
           PTKYPSGG KQL  ILT  +VP GG  +DIG+++QNVG+  A+ RA++ GEP+  RVVTL
Sbjct: 240 PTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTL 299

Query: 327 TGDCFRKPRNVWALLGTPVQALLNEFGY--KADKKLPRLIMGGPMMGFTLPHAQVPITKT 384
           TG+   +P NVWA LGTPV+ LLN+ G+   AD+ +   IMGGP+MGFTLP   VP+ K 
Sbjct: 300 TGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMV---IMGGPLMGFTLPWLDVPVVKI 356

Query: 385 ANCILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELDLKDC 444
            NC+LAP+ NEL     E +CIRC  CA+ACP  LLPQQL W +K ++ DK    ++ DC
Sbjct: 357 TNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADC 416

Query: 445 IECGACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKAEREN 504
           IECGACA+VCPS IPLVQY+RQ KAEI     E + A  AKARFE ++AR+ER+KA R  
Sbjct: 417 IECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLE 476

Query: 505 RFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQLEPTDNSVKPAIAAAIARAKAKQAE 564
           R K AA     +       DAIAAA+ RVK ++AQ      + +P +  A          
Sbjct: 477 RHKSAAVQPAAK-----DKDAIAAAVARVKEKQAQ------ATQPIVIKA---------- 515

Query: 565 AAQSGASEPDNSEMAKLREERKRQARERKAQKGEVTEASTSDGADDKKSAVAAAIARAKA 624
                   PDNS +   RE RK QAR ++A+  +  +A+T   AD +K+AV AAIARAKA
Sbjct: 516 -----GERPDNSAIIAAREARKAQARAKQAELQQTNDAATV--ADPRKTAVEAAIARAKA 568

Query: 625 RKAEQQETESAAQPAQATPSSDDADPKKAAVAAAIARAKARKAEQQETESTAQPAQATPS 684
           RK EQQ+       A A P  +  DP+KAAV AAIARAKARK EQQ  ++ A+P Q    
Sbjct: 569 RKLEQQQ-------ANAEP-EEQVDPRKAAVEAAIARAKARKLEQQ--QANAEPEQ---- 614

Query: 685 SDDADPKKAAVAAAIARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIARAKA 744
               DP+KAAV AAIARAKARK E+Q+    A+P Q        DP+KAAV AAIARAKA
Sbjct: 615 --QVDPRKAAVEAAIARAKARKLEQQQAN--AEPEQ------QVDPRKAAVEAAIARAKA 664

Query: 745 RKAEQQETESAAQPTQATPSSDDADPKKAAVAAAIARAKARKAAQQSSSNLNAEEKD 801
           RK EQ       QP  A P  +  DP+KAAV AAIARAKARK  QQ ++ +  E+ D
Sbjct: 665 RKREQ-------QPANAEP-EEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVD 713