Pairwise Alignments
Query, 801 a.a., electron transport complex subunit RsxC from Vibrio cholerae E7946 ATCC 55056
Subject, 963 a.a., Nitrogen fixation protein RnfC from Alteromonas macleodii MIT1002
Score = 684 bits (1765), Expect = 0.0
Identities = 400/892 (44%), Positives = 541/892 (60%), Gaps = 127/892 (14%)
Query: 30 SLIEQIKSGKLWDFPGGIHPFENKHQSNRQPIINASIPNELVLPLKQHIGKAGDLLVKVG 89
S+IE +++GK++ FPGG+HP + K SN I S+P L++PL+QHIG G V+VG
Sbjct: 7 SIIENLEAGKMYSFPGGVHPDDKKSLSNTSVIKKPSLPELLIVPLRQHIGSDGICCVEVG 66
Query: 90 DRVLKGQPLTQYTSTFMLPIHAPTSGVISAIEPRTVAHPSGLSELCIVLTPDQQEEWFEL 149
D VLKGQ L+Q +S F +P+HAPTSG + AI P VAHPSGL+E+CI + PD ++ W +L
Sbjct: 67 DTVLKGQILSQSSSPFSVPVHAPTSGEVVAIAPHVVAHPSGLTEMCISIRPDGKDTWCDL 126
Query: 150 QPQPDFQQLTPETLLELIRQAGISGMGGAGFPTAKKLQSGLSRTEILIINAAECEPYITA 209
P ++ + L+E I QAGISGMGGAGFPT K + E LI+N ECEPYIT+
Sbjct: 127 SPIANYSDIDKNKLIEAICQAGISGMGGAGFPTHIKTSTS-KPVEFLILNGIECEPYITS 185
Query: 210 DDVLMRQYAHEIIQGIEIVEHILKPKLTIIGIEDNKPEAVAALQQAAQDKPMVIRV-IPT 268
DD LMR++A +I QG++I+ H++ PK ++ +EDNKPEA AL A QDK V + T
Sbjct: 186 DDRLMREHAWQIRQGLDILTHLIGPKAIVVAVEDNKPEAFEALNIACQDKKDYRVVSVET 245
Query: 269 KYPSGGEKQLIKILTNLEVPKGGIPADIGLMVQNVGSLQAIARAIVHGEPLIRRVVTLTG 328
KYP+GGEKQLI++LT EVP+ G+PAD+G+M+ NVG+ AIA AI+HG+PLI RVVT+TG
Sbjct: 246 KYPAGGEKQLIQVLTGREVPRNGLPADVGVMMFNVGTCYAIADAILHGKPLIERVVTVTG 305
Query: 329 DCFRKPRNVWALLGTPVQALLNEFGYKADK-KLPRLIMGGPMMGFTLPHAQVPITKTANC 387
+ P N ALLGTPV LL+E Y K K P++IMGGPMMGFTL A +P+ KT NC
Sbjct: 306 EAVESPSNFRALLGTPVSHLLDEANYNPKKQKAPKVIMGGPMMGFTLSDATIPVVKTTNC 365
Query: 388 ILAPTRNELTSSDNEMACIRCGQCAEACPVSLLPQQLQWHAKAEEFDKCEELDLKDCIEC 447
+L P + EL + E CIRC CA+ACP SLLPQQ+ WHAKA+E+DK EE DL DCIEC
Sbjct: 366 LLVPAKKELVDDNAERPCIRCSACADACPASLLPQQMFWHAKAKEYDKAEEYDLFDCIEC 425
Query: 448 GACAYVCPSEIPLVQYYRQAKAEIRTRSLEAEAAERAKARFEEKKARMERDKAERENRFK 507
GACAYVCPSEIPLV YYRQAK+EIR + E AE+AK RFE +K R+ER+K ERE + +
Sbjct: 426 GACAYVCPSEIPLVHYYRQAKSEIRIQRDEKNKAEKAKQRFEARKERLEREKLEREEKHR 485
Query: 508 QAAEDR---RKEMQQQG---------------GSDAIAAAIERVKAQKAQLEP------- 542
+A E R K ++ D +AAA+ R KA+KA ++
Sbjct: 486 KAKEARLAANKAKEESAVADNANSAVDAGATEAKDKVAAALARAKAKKAAMQANAKDESN 545
Query: 543 TDNSVKPA---------IAAAIARAKAKQAEAAQS------------GASEPDNSEMAKL 581
T N+ +P+ +AAAIARAKAK+A AQ+ AS P++ + AK+
Sbjct: 546 TTNTNEPSTAADDKKAQVAAAIARAKAKKAAQAQNEAQLESADKQVEQASSPEDDKKAKV 605
Query: 582 -----REERKRQAR-ERKAQKGEVTEAST--------SDGADDKKSAVAAAIARAKARK- 626
R + K+ A+ + + Q+ E ST S D+KK+ VAAAIARAKA+K
Sbjct: 606 TAAIARAKAKKAAQAQNETQEESAVEPSTTEQPSNQSSSPEDEKKAKVAAAIARAKAKKA 665
Query: 627 --AEQQETESAAQPA-------------QATPSSDDADPKKAAVAAAIARAKARKAEQQE 671
A Q E SA + A +A + KKA +AAAIA+AKA+KA +
Sbjct: 666 AQASQSEASSAEKTAGSQGEKHTELSDTEANSELNAEAQKKARIAAAIAKAKAQKAAKNS 725
Query: 672 TESTAQPA---QATP----------SSDDADPKKAAVAAAIARAKARKAEKQETESAAQP 718
+ + Q P S++ D K+A +AAA+A+AKA+KA Q+T++++
Sbjct: 726 EDGQPDKSVSGQGAPTQLDEQTDSHSNEQLDEKQARIAAAVAKAKAKKAASQKTQASSPD 785
Query: 719 TQATPSSDDA---------------------------------DPKKAAVAAAIARAKAR 745
+A + DA D KKA +AAA+A+AKA+
Sbjct: 786 GEAGIENQDANSPEEASFQSVSDQNNSAQSDSASDPANNLSEADEKKARIAAAVAKAKAK 845
Query: 746 KAEQQETESAAQPTQA--TPSSDDADPKKAAVAAAIARAKARKAAQQSSSNL 795
KA +QE ++ T A S+++AD KKA +AAA+ +AKA+K AQ S+ NL
Sbjct: 846 KAAKQEEHQGSEQTDANDAASTNEADEKKARIAAAVTKAKAKKLAQDSNGNL 897
Score = 128 bits (321), Expect = 2e-33
Identities = 118/410 (28%), Positives = 197/410 (48%), Gaps = 120/410 (29%)
Query: 484 AKARFEEKKARMERDKAERENRFKQAAEDRRKEMQQQGGSDAIAAAIERVKAQKAQ---- 539
A AR + KKA +++A+ E+ KQ + E ++ + AAI R KA+KA
Sbjct: 566 AIARAKAKKAAQAQNEAQLESADKQVEQASSPEDDKKA---KVTAAIARAKAKKAAQAQN 622
Query: 540 -------LEPT------------DNSVKPAIAAAIARAKAKQA-EAAQSGASEP------ 573
+EP+ ++ K +AAAIARAKAK+A +A+QS AS
Sbjct: 623 ETQEESAVEPSTTEQPSNQSSSPEDEKKAKVAAAIARAKAKKAAQASQSEASSAEKTAGS 682
Query: 574 ---------DNSEMAKLREERKRQAR------ERKAQKG--------------------- 597
D ++L E +++AR + KAQK
Sbjct: 683 QGEKHTELSDTEANSELNAEAQKKARIAAAIAKAKAQKAAKNSEDGQPDKSVSGQGAPTQ 742
Query: 598 --EVTEASTSDGADDKKSAVAAAIARAKARKAEQQETESAA------------------- 636
E T++ +++ D+K++ +AAA+A+AKA+KA Q+T++++
Sbjct: 743 LDEQTDSHSNEQLDEKQARIAAAVAKAKAKKAASQKTQASSPDGEAGIENQDANSPEEAS 802
Query: 637 --------QPAQATPSSD------DADPKKAAVAAAIARAKARKAEQQETESTAQPAQA- 681
AQ+ +SD +AD KKA +AAA+A+AKA+KA +QE ++ A
Sbjct: 803 FQSVSDQNNSAQSDSASDPANNLSEADEKKARIAAAVAKAKAKKAAKQEEHQGSEQTDAN 862
Query: 682 -TPSSDDADPKKAAVAAAIARAKARKAEKQETESAAQPTQATPSSDDADPKKAAVAAAIA 740
S+++AD KKA +AAA+ +AKA+K + + A +S + ++++ A +
Sbjct: 863 DAASTNEADEKKARIAAAVTKAKAKKLAQDSNGNLA-------TSSNTAEQESSKAHEQS 915
Query: 741 RAKARKAEQQETESAAQPTQATPSSDDADPKKAAVAAAIARAKARKAAQQ 790
+ +R + T++ +QPT D KKA +AAA+A+AKA+KAA +
Sbjct: 916 ESSSRVGQATSTQAPSQPTA-------QDEKKARIAAAVAKAKAKKAAAE 958