Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (281), Expect = 1e-29
 Identities = 78/275 (28%), Positives = 123/275 (44%), Gaps = 42/275 (15%)

Query: 80  VTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQM 139
           VT+ L A+ +PP  P W   +G+ F +V+AK ++GG G+N  NPA+     L  ++P Q+
Sbjct: 161 VTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQI 220

Query: 140 TSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGIDGITMATPLDAFK---TSL 196
           +  +                                + T  DG + AT L  +       
Sbjct: 221 SGDL--------------------------------VWTAADGYSGATALSQWAQGGAGA 248

Query: 197 KAGHTMSETLT-QPQFSG-FAGIGWEWVNIAYLLGGLILLKLRIIRWHIPMAMLAGLVFT 254
              +   +T+T    F G   G   E   +A ++G   ++ + I  W I   ++ G++  
Sbjct: 249 LINNATGQTITWMDAFIGNIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILL 308

Query: 255 ALLAQLFAPGTTASPMI----HLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFIGAMV 310
           + L  +    T A   +    HL+ G    G FF+ATDPVSAS T+ G+  YG  IG M 
Sbjct: 309 STLFNVIGSDTNAMFNMPWHWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMC 368

Query: 311 FLIRSWG-GFPDGVAFAVLLANMCVPLIDYYTKPR 344
            LIR     +P+G+  A+L AN+  PL D+    R
Sbjct: 369 VLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVER 403