Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., putative electron transport complex protein from Pseudomonas putida KT2440

 Score =  245 bits (625), Expect = 1e-69
 Identities = 144/338 (42%), Positives = 193/338 (57%), Gaps = 33/338 (9%)

Query: 7   SSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAGIMLLRK 66
           SSP  R + S   V+   LAC  PGL+A  +  G+G ++ LLL  S A+  EA ++ LR 
Sbjct: 2   SSPDPRLRTSMGLVL---LACT-PGLLALLWLHGWGMMLNLLLCASAALLCEALLLALRS 57

Query: 67  RSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMI 126
           +S   AL D SA+VTA LLA A+P L+PWW+ VI    AI I K  YGG+G+N FNPAM+
Sbjct: 58  QSLSQALNDGSALVTAVLLAAALPTLAPWWLPVIAASVAIGIGKQAYGGVGRNLFNPAMV 117

Query: 127 AYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGIDGITMA 186
            Y  +L+SFP+QM  W        +   L+DS   +F G              ID     
Sbjct: 118 GYAFVLLSFPLQMNHW------PGQAPGLLDSVQQVFAGGGQ-----------IDAWARP 160

Query: 187 TPLDAFKTSLKAGHTMSETL-----TQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIRW 241
           T LD  +      H  S T+     + P F    G G EWVN+A+LLGGL LL+ ++I W
Sbjct: 161 TLLDGLR------HNRSLTIDELFASHPGFGNIGGAGSEWVNLAFLLGGLFLLQRKVISW 214

Query: 242 HIPMAMLAG-LVFTALLAQLFAPGTTASPMIHLLSGATMLGAFFIATDPVSASTTDKGRL 300
           H P  +LAG LVF+ L        +  SP++HL SG+TML AFFIAT+PVS    D  +L
Sbjct: 215 HAPAGLLAGLLVFSLLGWNGSGSDSNGSPLLHLFSGSTMLAAFFIATEPVSGPRDDWAKL 274

Query: 301 IYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLID 338
            +G   G +++LIR+WG +PDG AFAVLL N+  P ++
Sbjct: 275 CFGVGTGVLIYLIRTWGSYPDGTAFAVLLMNLFAPALE 312