Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., electron transporter RnfD from Magnetospirillum magneticum AMB-1

 Score =  247 bits (630), Expect = 4e-70
 Identities = 137/349 (39%), Positives = 199/349 (57%), Gaps = 20/349 (5%)

Query: 7   SSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAGIMLLRK 66
           S P      S    M  VLA   P  +   + FG   +   L+ ++     EA  + +  
Sbjct: 8   SGPFTHGPNSVQRTMFTVLAALAPATLYNLWLFGLPAIFLFLVTMAACALCEAACIRISG 67

Query: 67  RSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMI 126
            +P  AL D S  +T WLLA+++PP +PWWV V+  +FA+ +AKH +GGLGQN FNPAM+
Sbjct: 68  GNPDRALGDGSVAITGWLLALSLPPWAPWWVAVVASVFAVCLAKHAFGGLGQNVFNPAMV 127

Query: 127 AYVVLLISFPVQMTSWMAPIKL-TAEPSSLVDSFSLIFG-GFDSDGLSLQQIRTGIDGIT 184
             VV+L+SFP+QMTS++ P  L T     L +S ++ FG GF             +DGI+
Sbjct: 128 GRVVVLVSFPLQMTSFVTPKPLFTPGSPGLAESLTITFGRGFT------------LDGIS 175

Query: 185 MATPLDAFKTSLKAGHTMSETLTQPQFSGFAGIGW------EWVNIAYLLGGLILLKLRI 238
            A+PL   KT L  G  ++++L+     G   IG+      E      LLGGL L+  +I
Sbjct: 176 TASPLGFIKTELSKGVPVTQSLSSFPSLGDMMIGFHPGSMGETAVPLILLGGLFLMWRKI 235

Query: 239 IRWHIPMAMLAGLVFTALLAQLFAPGTTASPMIHLLSGATMLGAFFIATDPVSASTTDKG 298
           I WHIP++MLA L     +     P    S M+ LLSGA+ LGAFFIATD V++  +  G
Sbjct: 236 ISWHIPVSMLATLFLMGTIFSTLDPARHTSGMVQLLSGASFLGAFFIATDYVTSPVSKSG 295

Query: 299 RLIYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPRTYG 347
           +L +GF +G + ++IR++ G+P+GVAFAVLL N   P++D + +PR +G
Sbjct: 296 QLAFGFGVGLLTWIIRTYAGYPEGVAFAVLLMNALTPILDQHFRPRVFG 344