Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., electron transport complex protein RnfD (NCBI) from Escherichia coli BW25113

 Score =  424 bits (1090), Expect = e-123
 Identities = 205/349 (58%), Positives = 268/349 (76%), Gaps = 1/349 (0%)

Query: 1   MAFFIASSPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAG 60
           M F IASSP+  ++R T+ +M  VL  A+PG+ AQ +FFG+GTL+Q+LLA   A+  EA 
Sbjct: 1   MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60

Query: 61  IMLLRKRSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNP 120
           ++ LRK+S  + L+D SA++T  LLAV+IPPL+PWW+VV+G +FA++IAK LYGGLGQNP
Sbjct: 61  VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120

Query: 121 FNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTGI 180
           FNPAMI YVVLLISFPVQMTSW+ P ++       +D+  +IF G  + G  +  +R GI
Sbjct: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180

Query: 181 DGITMATPLDAFKTSLKAGHTMSETLTQPQFSG-FAGIGWEWVNIAYLLGGLILLKLRII 239
           DGI+ ATPLD FKTS++AGH++ + +  P +SG  AG GW+WVN+A+L GG+ LL  + I
Sbjct: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240

Query: 240 RWHIPMAMLAGLVFTALLAQLFAPGTTASPMIHLLSGATMLGAFFIATDPVSASTTDKGR 299
           RWHIP++ L  L   A+L  LF+P T A+P IHLLSGATMLGAFFI TDPV+ASTT++GR
Sbjct: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300

Query: 300 LIYGFFIGAMVFLIRSWGGFPDGVAFAVLLANMCVPLIDYYTKPRTYGH 348
           LI+G   G +V+LIRS+GG+PDGVAFAVLLAN+ VPLIDYYT+PR YGH
Sbjct: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGH 349