Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (319), Expect = 5e-34
 Identities = 106/360 (29%), Positives = 161/360 (44%), Gaps = 63/360 (17%)

Query: 14  KRSTADVMRWVLACALPGL----------IAQTYFFGYGTLIQLLLAISVA-VALEAG-- 60
           KR    V+  +L C L G+          + ++  FG   L+ L L + +  VA  AG  
Sbjct: 56  KRMMITVVVALLPCLLFGIYNVGEQHFLAVGESVGFGEKFLLGLKLVLPIVIVAYAAGGI 115

Query: 61  ---IMLLRKRSPISALRDYSAVVTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLG 117
              I  + ++ PI+       +VT  L+ + +P   P W V +  IFA+VIAK ++GG G
Sbjct: 116 VEAIFAVIRKHPINE----GFLVTGMLVPLVVPATMPLWQVALATIFAVVIAKEVFGGTG 171

Query: 118 QNPFNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIR 177
            N  N AM A   L  ++P Q++                D      G            +
Sbjct: 172 MNILNVAMTARAFLYFAYPAQISG---------------DQVWTYLGE-----------K 205

Query: 178 TGIDGITMATPLDAFKTSLKAGHTMSETLTQ------PQFSGFAGIGWEWV--------N 223
           T +DG + AT L     + ++G  ++  L         Q   FA + + ++         
Sbjct: 206 TAVDGFSGATALSVAYGAGQSGEAVTSALATHNAAIGDQLYSFANMFFGFIPGSIGETSA 265

Query: 224 IAYLLGGLILLKLRIIRWHIPMAMLAGLVFTALLAQLFAPGT-TASPM-IHLLSGATMLG 281
           +  L+G LIL+   +  W I ++  AG     L+   FA     A P   HL+ G    G
Sbjct: 266 LMCLIGALILIATGVGSWKIIVSGFAGTYIMGLIMNAFAANEFMAMPAHYHLVMGGVAFG 325

Query: 282 AFFIATDPVSASTTDKGRLIYGFFIGAMVFLIRSWG-GFPDGVAFAVLLANMCVPLIDYY 340
             F+ATDPVSAS T+KG+ +YG  IG +  +IR     +P+G+  AVLL N+  PLIDYY
Sbjct: 326 IVFMATDPVSASQTEKGKWLYGLLIGFLTVIIRVTNPAYPEGIMLAVLLMNVFAPLIDYY 385