Pairwise Alignments

Query, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Na(+)-translocating NADH-quinone reductase subunit B from Alteromonas macleodii MIT1002

 Score =  133 bits (335), Expect = 7e-36
 Identities = 92/269 (34%), Positives = 133/269 (49%), Gaps = 44/269 (16%)

Query: 80  VTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQM 139
           VT+ L A+ +P   P W V +G+ F +VIAK ++GG G+N  NPA+     L  ++P Q+
Sbjct: 154 VTSVLFALTLPATIPLWQVALGITFGVVIAKEVFGGTGRNFLNPALSGRAFLYFAYPAQI 213

Query: 140 TSWMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTG-IDGITMATPLDAFKTSLKA 198
           +                D   +   G+ S   SL Q  +G +D   M   +++F  ++  
Sbjct: 214 SG---------------DQVWVAADGY-SGATSLSQAASGNLDYANMDQWMNSFIGTI-- 255

Query: 199 GHTMSETLTQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIRWHIPMAMLAGLVFTALLA 258
                        SG AG   E   +A +LGGL ++ +RI  W I   +  G+ F A L 
Sbjct: 256 -------------SGSAG---EVSTLAIILGGLFIMYMRIASWRIVAGVAIGVAFFATLL 299

Query: 259 QLFAPGTTASPMI------HLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFIGAMVFL 312
            L   G+  +PM       H + G    G FF+ATDPVSAS T++G+  YG FIG M  L
Sbjct: 300 NLI--GSDTNPMFAMPAHWHFVVGGLAFGMFFMATDPVSASFTNQGKWAYGIFIGFMTVL 357

Query: 313 IRSWG-GFPDGVAFAVLLANMCVPLIDYY 340
           IR     FP+GV  A+L AN+  PL DY+
Sbjct: 358 IRVLNPAFPEGVMLAILFANLWAPLFDYF 386