Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 2/101 (1%)

Query: 187 YDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLR 246
           +D G + EL  ++ + + +I ++++ N    +V +  Y D+T     +  LS  RA+ + 
Sbjct: 160 FDTGEA-ELKNSANRTVLKIVQFLQLNPK-RVVRIEGYADNTGGERENLKLSRDRAQSVA 217

Query: 247 EYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVI 287
           +    +G+ E RIQV+GYG + P+  NAS  G+ +NRRV I
Sbjct: 218 DVLVDLGIDEKRIQVEGYGDQYPVEANASERGRAQNRRVEI 258