Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., porin from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 28/71 (39%), Positives = 44/71 (61%)

Query: 219 VLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIG 278
           V V+ +TDS   +  +Q LS++RA+ +++     G+   RI   GYG+ RP+ADNA+  G
Sbjct: 251 VEVAGHTDSVGPDAYNQKLSQRRADAVKQVLVKDGVAPSRITAVGYGESRPVADNATEAG 310

Query: 279 KDKNRRVVISL 289
           +  NRRV  S+
Sbjct: 311 RAVNRRVEASV 321