Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 7e-14
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 2/108 (1%)

Query: 180 ISFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSE 239
           I+F  + +D G + +L   SQ+    +A ++  N +   V V  +TDS   +  +Q+LSE
Sbjct: 139 ITFGDVLFDTGKA-DLKAGSQRDFQGLANFLVQNPERQ-VRVEGFTDSVGGDAYNQSLSE 196

Query: 240 QRAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVI 287
           +RA+ +    + +G+  +RI V GYGK+ P+ADN S   +  NRRV +
Sbjct: 197 RRAQAVARGLQRLGVGIERIAVIGYGKQFPVADNQSAQSRQLNRRVEV 244