Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)

Query: 169 ISKLLPYSFEDISFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDST 228
           + ++L    E I    +H+ Q  S +L  A +  L  IA  ++       + VS +TDS 
Sbjct: 109 VEEVLVVKEETIVIRDVHF-QFDSAKLTAADKTNLDTIATRLKQEAPTAQLRVSGHTDSV 167

Query: 229 DTNNNSQNLSEQRAEVLREYFKSIGLPEDR-IQVQGYGKRRPIADNASPIGKDKNRRVVI 287
             +  +Q LS++RA  + +Y    G+P    + V G G+  P+ADN +  G+  NRR  I
Sbjct: 168 GNDAYNQKLSDKRAHSVTDYLIGAGVPRSNFVSVTGAGESHPVADNKTAEGRALNRRTEI 227

Query: 288 SLGR 291
            + R
Sbjct: 228 QINR 231