Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 194 ELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKSIG 253
           +L  +    + ++A+++R N D   V+V  YTDST +++ +Q+LSE+RA  ++      G
Sbjct: 152 DLKSSGLVNITKLAQFLRDNPDRK-VIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQG 210

Query: 254 LPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
           +   RI  QGYGK  P+ADN S  G+  NRRV +++
Sbjct: 211 VDISRIVTQGYGKEYPVADNGSVSGRAMNRRVEVTI 246