Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 22/165 (13%)

Query: 146 DQRIEVALSSVLFQQPYNEFSDCISKLLPYSFE---------DISFTILHYDQGTSV--- 193
           +QR+EVA  ++  +    E  +  ++      +           S      D+GT V   
Sbjct: 83  NQRVEVAKQTIALRTAEAELKNASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFG 142

Query: 194 ----ELNKASQK-----RLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEV 244
               + NKA  K      + ++A++++ N +   V+V  YTDS  + N +Q LSE+RA  
Sbjct: 143 DVLFDFNKAELKSNAYPNITKLAQFLQENPERK-VIVEGYTDSVGSANYNQTLSERRANS 201

Query: 245 LREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
           +R      G+   RI  QGYGK  P+ADN+S  G+ +NRRV +++
Sbjct: 202 VRMALVRAGVDPARIVSQGYGKEYPVADNSSNSGRAQNRRVEVTI 246