Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., Peptidoglycan-associated lipoprotein from Pseudomonas sp. DMC3

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 22/165 (13%)

Query: 146 DQRIEVALSSVLFQQPYNEFSDCISKLLPYSFE---------DISFTILHYDQGTSVEL- 195
           +QR+EVA  ++  +   N   +  ++      +           S      D+GT V   
Sbjct: 83  NQRVEVAKQTIALRTAENNLKNAAAQRAQARLDARDQQIKQLQDSLNAKQTDRGTLVTFG 142

Query: 196 ------NKASQK-----RLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEV 244
                 NKA  K      + ++A++++ N D   V+V  YTDST T + +Q+LSE+RA  
Sbjct: 143 DVLFATNKADLKSSGLVNINKLAQFLQENPDRK-VIVEGYTDSTGTASYNQSLSERRATS 201

Query: 245 LREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
           ++     +G+   RI  QGYGK  P+ADN S  G+  NRRV +++
Sbjct: 202 VQMALIKMGVDPSRIVAQGYGKEYPVADNGSVSGRAMNRRVEVTI 246