Pairwise Alignments

Query, 294 a.a., flagellar protein MotY from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., porin from Agrobacterium fabrum C58

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 27/70 (38%), Positives = 45/70 (64%)

Query: 218 LVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPI 277
           L+ ++ +TDST +  ++Q LSE+RA  +  Y  + G+ + RI   G+G  +PIA NA+  
Sbjct: 144 LIDINGHTDSTGSLQHNQALSERRAASVANYLGARGVDQRRISTLGFGPSQPIASNATSD 203

Query: 278 GKDKNRRVVI 287
           G+ +NRRV +
Sbjct: 204 GRAQNRRVEV 213