Pairwise Alignments

Query, 441 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  523 bits (1347), Expect = e-153
 Identities = 261/441 (59%), Positives = 337/441 (76%), Gaps = 2/441 (0%)

Query: 1   MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALS 60
           MN V+ +V +ML+L+L RV+VV+AL   A+ GGLV G+ +  T+ AF  GLGGGAT+ALS
Sbjct: 1   MNAVIAAVGIMLILSLSRVHVVIALIIGALAGGLVGGLGIEGTLKAFNGGLGGGATVALS 60

Query: 61  YAMLGTFAVAISKSGITDLLAQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIP 120
           YA+LG FAVAI+KSG+   LA   +  I  +   A    +K+L++  +L +A++SQN++P
Sbjct: 61  YALLGAFAVAIAKSGLAHALADRALGMID-RRGDAKGGKVKWLMIGLMLAVAVSSQNILP 119

Query: 121 VHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYMVLPVGFGGIFLNNILLKNLH 180
           +HIAFIP+L+PPLL V  +L++DRRL+ACV+TFGLITPYM LPVGFG IFLN ILL N+ 
Sbjct: 120 IHIAFIPLLVPPLLYVLTRLRIDRRLIACVITFGLITPYMFLPVGFGNIFLNEILLANVA 179

Query: 181 ENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH 240
             G++ ++   V  AM +PAAGM+ GLL+AV  SYRK R+Y    +  V+Q S   N   
Sbjct: 180 RAGVD-VSGVNVTHAMAIPAAGMLVGLLVAVFISYRKKRDYDLARIQQVEQVSVQYNPLT 238

Query: 241 IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFI 300
           + +AG+ I AA  VQLL  SMIIGA+ GF++F+  G++ WKET D+FT G+ MMAMIGFI
Sbjct: 239 LLVAGLAIAAAFIVQLLLDSMIIGAMVGFLIFSLSGIVKWKETDDLFTEGMKMMAMIGFI 298

Query: 301 MISAAGFAAVMKATGGVETLVTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPII 360
           MI+A+GFA VMKATG V++LV + +  I  +K + ALLML+VGLLVTMGIGSSFST+PI+
Sbjct: 299 MITASGFAEVMKATGEVKSLVETSAQWIDHSKGVGALLMLLVGLLVTMGIGSSFSTVPIL 358

Query: 361 ATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHIWETVV 420
           A I+VPLC+  GF P+ATV ++GTA ALGDAGSPASDSTLGPTSGLN DGQH HIW+TVV
Sbjct: 359 AAIFVPLCVQLGFDPLATVCIIGTAGALGDAGSPASDSTLGPTSGLNVDGQHHHIWDTVV 418

Query: 421 PTFIHYNLPLIVFGWIAAMVL 441
           PTFIHYNLPL+ FGW+AAM L
Sbjct: 419 PTFIHYNLPLMAFGWLAAMTL 439