Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., tRNA pseudouridine(38-40) synthase TruA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  108 bits (269), Expect = 2e-28
 Identities = 83/250 (33%), Positives = 113/250 (45%), Gaps = 12/250 (4%)

Query: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           MR    I Y G +Y GWQR      VQ+ LE++L KI   PV +   GRTDAGVH +   
Sbjct: 1   MRYFFHIGYQGANYKGWQRHPYGIGVQQVLEESLGKILKAPVAIVGCGRTDAGVHASQFF 60

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
            H D  AE          N  LP DIAV   + +    HARF AT R Y Y I  H Y+ 
Sbjct: 61  FHLD-VAEPWAFDMLFRLNKVLPPDIAVFDILPMEGLPHARFDATQRNYDYFI--HTYKD 117

Query: 121 GILNSGVSHY-HGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTR--- 176
             L+   S Y    L++E M+ A   L   +D+ S      +  S    + H+   R   
Sbjct: 118 PFLSHTSSLYLVNNLNLEAMKAATALLPRYSDYRSLCLAPAEHES---TICHVTAARWLT 174

Query: 177 --HGRYVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAE 234
              G  +   I AN ++  M+R + G L+ VG G       +  L+ ++     + A  +
Sbjct: 175 DSRGDRLRFQIAANRYLSRMIRILVGQLLKVGSGTLSLGEFESYLSTENAPKHLSPAHPQ 234

Query: 235 GLYLVSVDYP 244
           GLYL  V YP
Sbjct: 235 GLYLSKVSYP 244