Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  225 bits (574), Expect = 6e-64
 Identities = 117/246 (47%), Positives = 154/246 (62%), Gaps = 1/246 (0%)

Query: 7   IEYDGTHYYGWQRQREVKSVQEALEKALSK-IANHPVEVQCAGRTDAGVHGTGQVVHFDT 65
           + Y+G  Y GWQ Q   ++VQ+ LE+AL++ IA   V+  CAGRTDAGVHG  QVVHFDT
Sbjct: 1   VSYNGRAYDGWQSQPGGRTVQDHLEQALARFIAQDAVKTLCAGRTDAGVHGLMQVVHFDT 60

Query: 66  TAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPGILNS 125
             ER   AW  G N+ LP +IAV+WA  VP  FHAR SA +RRY YV+     RP +   
Sbjct: 61  PVERPENAWVRGTNSFLPDNIAVQWARHVPQSFHARASARSRRYAYVLLESPVRPSVDAG 120

Query: 126 GVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYVVIDI 185
            V      L +E M QA Q LLGE+DFTSFRA  CQ+ SP +++M +++ R G Y   + 
Sbjct: 121 QVGWVFRPLALEPMLQAAQTLLGEHDFTSFRAAQCQAHSPVKHLMRVDIARRGSYWRFEF 180

Query: 186 KANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSVDYPA 245
           +A+AF+HHM+RNI G LIA+G G +   W+  +L  + R  AA T   +GLY +   Y A
Sbjct: 181 EASAFLHHMIRNIMGCLIAIGSGNRPAAWMTEVLEARSRDAAAPTFSPDGLYFLGPVYDA 240

Query: 246 HFGLPE 251
             GLP+
Sbjct: 241 GLGLPQ 246