Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  404 bits (1039), Expect = e-118
 Identities = 193/260 (74%), Positives = 217/260 (83%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           +IALGIEYDG+ YYGWQRQ EV+SVQE LEKALS++AN P+ V CAGRTDAGVHGTGQVV
Sbjct: 11  KIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPINVFCAGRTDAGVHGTGQVV 70

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPG 121
           HF+TTA R+  AWT+G NANLP DIAVRW   VPD+FHARFSATARRYRY+IYNH  RP 
Sbjct: 71  HFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPA 130

Query: 122 ILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYV 181
           +L  GV+HY+  LD E+M +A Q LLGENDFTSFRAV CQSR+PWRNVMH+NVTRHG YV
Sbjct: 131 VLAKGVTHYYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYV 190

Query: 182 VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           V+DIKANAFVHHMVRNI GSL+ VG   Q   WI  LLA +DRTLAAATAKAEGLYLV+V
Sbjct: 191 VVDIKANAFVHHMVRNIVGSLLEVGAHNQPESWIAELLAARDRTLAAATAKAEGLYLVAV 250

Query: 242 DYPAHFGLPEMPIGPLFLPD 261
           DYP  F LP+ P+GPLFL D
Sbjct: 251 DYPDRFDLPKPPMGPLFLAD 270