Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., tRNA pseudouridine(38-40) synthase TruA from Erwinia amylovora T8

 Score =  396 bits (1018), Expect = e-115
 Identities = 190/261 (72%), Positives = 219/261 (83%)

Query: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           M++ALGIEYDG+ YYGWQRQ EV+SVQE LEKAL+++A+ P+ V CAGRTDAGVH TGQV
Sbjct: 11  MKLALGIEYDGSRYYGWQRQNEVRSVQEKLEKALTRVADGPIAVFCAGRTDAGVHSTGQV 70

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           VHF+TTA+R+  AWT+G NANLP DIAVRW  +VPD+FHARFSATARRYRYVIYN   RP
Sbjct: 71  VHFETTAQRKDAAWTLGVNANLPADIAVRWVKSVPDDFHARFSATARRYRYVIYNRRLRP 130

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
            IL +GV+H++  LDVEKMQ AGQ LLGENDFTSFRAV CQSR+P RNVMHLNV+RHG Y
Sbjct: 131 AILAAGVTHFYHPLDVEKMQSAGQCLLGENDFTSFRAVQCQSRTPMRNVMHLNVSRHGAY 190

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           VV+DIKANAFVHHMVRNI GSL+ +G G Q   W+  LLA KDR LAAATA+AEGLYLV+
Sbjct: 191 VVVDIKANAFVHHMVRNIVGSLMEIGCGNQPESWMSELLAAKDRKLAAATARAEGLYLVA 250

Query: 241 VDYPAHFGLPEMPIGPLFLPD 261
           VDYP  + LP  P+GPLFL D
Sbjct: 251 VDYPDSYELPSPPMGPLFLGD 271