Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., tRNA pseudouridine(38-40) synthase TruA from Erwinia tracheiphila SCR3

 Score =  407 bits (1045), Expect = e-118
 Identities = 196/260 (75%), Positives = 220/260 (84%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R+ALGIEYDG  YYGWQRQ+EV+SVQE LEKALS +A HPV V CAGRTDAGVHGTGQVV
Sbjct: 12  RLALGIEYDGARYYGWQRQQEVRSVQEKLEKALSSVAAHPVTVFCAGRTDAGVHGTGQVV 71

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPG 121
           HFDTT  R+  AWT+G NANLP DIAVRW  AVPD+FHARFSATARRYRYVIYN   RP 
Sbjct: 72  HFDTTVLRKDTAWTLGVNANLPDDIAVRWVKAVPDDFHARFSATARRYRYVIYNQRLRPA 131

Query: 122 ILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYV 181
           IL+ GV+H++  LDV+KMQ+AGQ LLGENDFTSFRAV CQSR+PWRNVMHLNV+RHG +V
Sbjct: 132 ILHGGVTHFYHPLDVQKMQRAGQALLGENDFTSFRAVQCQSRTPWRNVMHLNVSRHGVWV 191

Query: 182 VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           V+DIKANAFVHHMVRNI GSL+ +G G Q+  W+  LLA KDRTLAAATA+AEGLYLV+V
Sbjct: 192 VVDIKANAFVHHMVRNIVGSLMEIGCGNQQESWMAELLAAKDRTLAAATARAEGLYLVAV 251

Query: 242 DYPAHFGLPEMPIGPLFLPD 261
           DYP  F LP  P+GPLFL D
Sbjct: 252 DYPECFDLPRPPMGPLFLAD 271