Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., tRNA pseudouridine(38-40) synthase TruA from Bacteroides stercoris CC31F

 Score =  150 bits (379), Expect = 3e-41
 Identities = 95/250 (38%), Positives = 131/250 (52%), Gaps = 15/250 (6%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  + + YDGT Y+GWQ Q    SVQE L KALS +    VEV  AGRTDAGVH +  V 
Sbjct: 3   RYFIYLAYDGTAYHGWQIQPNGASVQECLMKALSILLRREVEVVGAGRTDAGVHASLMVA 62

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVI------YN 115
           HFD+     ++  T   N  LP DI+V    AV  + HARF ATAR Y+Y +      +N
Sbjct: 63  HFDSETPLDVIFMTDKLNRLLPPDISVYRLRAVRPDAHARFDATARTYKYYVTTAKMPFN 122

Query: 116 HVYRPGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVT 175
             YR  +  +         D E+M +A + L    DFTSF  +H   ++    +MH   T
Sbjct: 123 RQYRCRLFQTP--------DFERMNEAARTLFEYTDFTSFSKLHTDVKTNNCKIMHAAWT 174

Query: 176 RHGRYV-VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAE 234
           +      V  I+A+ F+ +MVR + G+L+ VGRG+      + ++ QKDR  A  +    
Sbjct: 175 QVDEVTWVFTIQADRFLRNMVRAVVGTLLEVGRGKLTIGGFRRVIEQKDRCRAGTSVPGN 234

Query: 235 GLYLVSVDYP 244
            L+LV V YP
Sbjct: 235 ALFLVDVAYP 244