Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., tRNA pseudouridine synthase A from Bacteroides ovatus ATCC 8483

 Score =  157 bits (397), Expect = 2e-43
 Identities = 97/250 (38%), Positives = 137/250 (54%), Gaps = 15/250 (6%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  + + YDGT+Y+GWQ Q    SVQE L KALS      +EV  AGRTDAGVH +  V 
Sbjct: 3   RYFIYLAYDGTNYHGWQIQPNGISVQECLMKALSTFLRREIEVIGAGRTDAGVHASLMVA 62

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVI------YN 115
           HFD+       + T   N  LP DI+V     V  + HARF ATAR Y+Y +      +N
Sbjct: 63  HFDSDELLDTTSVTDKLNRLLPPDISVYRVCRVRPDTHARFDATARTYKYYVTTSKYPFN 122

Query: 116 HVYRPGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVT 175
             YR  + N        +L+ E+M +A + L   NDFTSF  +H   ++   ++ H   T
Sbjct: 123 RQYRWRLYN--------QLNYERMNEAARILFEYNDFTSFSKLHTDVKTNICHITHAEWT 174

Query: 176 RHGRYV-VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAE 234
           +      V  I+A+ F+ +MVR I G+LI VGRG+   E  + ++ Q+DR  A  +A  +
Sbjct: 175 QEEDATWVFTIRADRFLRNMVRAIVGTLIEVGRGKLTVEGFRRIIEQQDRCKAGTSAPGQ 234

Query: 235 GLYLVSVDYP 244
            L+LV+V+YP
Sbjct: 235 ALFLVNVEYP 244