Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., tRNA pseudouridine(38-40) synthase from Escherichia coli BL21

 Score =  405 bits (1040), Expect = e-118
 Identities = 193/260 (74%), Positives = 219/260 (84%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           +IALGIEYDG+ YYGWQRQ EV+SVQE LEKALS++AN P+ V CAGRTDAGVHGTGQVV
Sbjct: 11  KIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVV 70

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPG 121
           HF+TTA R+  AWT+G NANLP DIAVRW  AVPD+FHARFSATARRYRY+IYNH  RP 
Sbjct: 71  HFETTALRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRYIIYNHRLRPA 130

Query: 122 ILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYV 181
           +L+ GV+H++  LD E+M +A Q LLGENDFTSFRAV CQSR+PWRNVMH+NVTRHG YV
Sbjct: 131 VLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYV 190

Query: 182 VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           V+DIKANAFVHHMVRNI GSL+ VG   Q   WI  LLA KDRTLAAATAKAEGLYLV+V
Sbjct: 191 VVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAV 250

Query: 242 DYPAHFGLPEMPIGPLFLPD 261
           DYP  + LP+ P+GPLFL D
Sbjct: 251 DYPDRYDLPKPPMGPLFLAD 270