Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., tRNA pseudouridine synthase A from Azospirillum sp. SherDot2

 Score =  167 bits (423), Expect = 2e-46
 Identities = 99/244 (40%), Positives = 139/244 (56%), Gaps = 3/244 (1%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  L +EYDG  + GWQRQ    SVQ++LE+A+ +++   V V  +GRTDAGVH  GQV 
Sbjct: 3   RWKLTVEYDGRPFVGWQRQDNGPSVQQSLEEAVQRLSGEVVRVHGSGRTDAGVHALGQVC 62

Query: 62  HFDTTAERQMVAWTMGANANL-PKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           HFD       +      N +L P  IAV    AV ++FHAR ++T R Y Y I N    P
Sbjct: 63  HFDLEKPFTGLKLRDALNFHLKPAPIAVLEVEAVTEDFHARLTSTGRAYVYRIVNR-RAP 121

Query: 121 GILNSGVS-HYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGR 179
             L SG + H    L+ E M +A Q L+G++DF+SFRA  CQ++SP + +  L V R G 
Sbjct: 122 LALESGRAWHVTRPLNAEAMHEAAQVLVGQHDFSSFRAALCQAKSPVKTLDRLAVEREGE 181

Query: 180 YVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLV 239
            + I   A +F+HH VRN+ G+L  VG G+   + ++  L  +DR  A  T   +GLY +
Sbjct: 182 EIRIHAAARSFLHHQVRNMVGTLELVGAGKWTVDDVRRALDARDRAKAGPTCPPDGLYFM 241

Query: 240 SVDY 243
           +  Y
Sbjct: 242 AARY 245