Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., tRNA pseudouridine synthase A from Alteromonas macleodii MIT1002

 Score =  359 bits (921), Expect = e-104
 Identities = 176/260 (67%), Positives = 203/260 (78%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           RIALGIEYDG   YGWQRQREV SVQE LEKALS +AN P+EVQCAGRTDAGVH TGQVV
Sbjct: 3   RIALGIEYDGAAVYGWQRQREVPSVQEHLEKALSTVANQPIEVQCAGRTDAGVHATGQVV 62

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPG 121
           HF+  A R   AWT+G NANLP  +AV WA  V D+FHARFSAT RRYRYVI+N   RP 
Sbjct: 63  HFNCDAPRSERAWTLGVNANLPNSVAVTWAKNVSDDFHARFSATHRRYRYVIHNAKMRPA 122

Query: 122 ILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYV 181
           IL+SGV+H H ELD +KM  A Q LLGE DFTSFRA  CQS++P+RNV  ++V R GRYV
Sbjct: 123 ILHSGVTHIHRELDEKKMHVAAQALLGEQDFTSFRAALCQSKTPFRNVTDVSVYRQGRYV 182

Query: 182 VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           +IDI+ANAF+HHMVRNITG+L+ +G GEQ   WI  LL+ KDR+ +AATAK  GLYLV V
Sbjct: 183 IIDIRANAFLHHMVRNITGALVEIGAGEQDVNWIAHLLSLKDRSKSAATAKPNGLYLVDV 242

Query: 242 DYPAHFGLPEMPIGPLFLPD 261
            YP   GLP+ P+GPLFLP+
Sbjct: 243 TYPDEHGLPKPPLGPLFLPE 262