Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., tRNA pseudouridine synthase I from Agrobacterium fabrum C58

 Score =  182 bits (462), Expect = 6e-51
 Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 3/246 (1%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  + +EYDGT YYGWQRQ    SVQ ALE A+  +    V ++ AGRTD+GVH  GQV 
Sbjct: 3   RFRMTVEYDGTPYYGWQRQENGPSVQGALEAAVRSLTGESVSIRGAGRTDSGVHAVGQVA 62

Query: 62  HFDTTAERQMVAWTMGANANLP---KDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVY 118
           H D + + +        NA+L    + +AV  A AV ++F ARFSA  R Y Y I     
Sbjct: 63  HIDLSRDWEPYKLRNALNAHLAMAGEAVAVLDAAAVTEDFDARFSALRRHYLYRIICRKS 122

Query: 119 RPGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHG 178
           R  + +        +LD E+M +A Q L+G +DFT+FR+VHCQ+ SP R +  L+VTR+G
Sbjct: 123 RLALEHKRAWWVSKDLDHERMHEAAQMLVGRHDFTTFRSVHCQANSPVRTLDRLDVTRNG 182

Query: 179 RYVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYL 238
             + I   A +F+H+ +R+  G+L   G G   P+ ++  L  +DR      A  +GLY 
Sbjct: 183 DLIEIRATAQSFLHNQIRSFAGTLKLAGEGGMTPDDVRAALEARDRKACGPVAPPDGLYF 242

Query: 239 VSVDYP 244
           + VDYP
Sbjct: 243 MQVDYP 248