Pairwise Alignments

Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 787 a.a., fimbrial protein FimV from Rhodanobacter sp000427505 FW510-R12

 Score = 64.7 bits (156), Expect = 4e-14
 Identities = 68/203 (33%), Positives = 92/203 (45%), Gaps = 20/203 (9%)

Query: 83  PTSANQTLWSIASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTLIPGSTLRVPSLAQI 142
           P    QTL SIA  + PS  V VQQ +LA+ Q NP AF   NI+ L  G  LRVP+ A+ 
Sbjct: 195 PVERGQTLSSIARSVTPSG-VDVQQMMLALQQANPNAFYRNNINALKTGVVLRVPTSAE- 252

Query: 143 SRNSTQDAVNIMASHQAKLNQTPDTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQ 202
                  A+ I A+      Q  D   R   P +PA VA     A A+T      T AP 
Sbjct: 253 -----AQAMTIAAAVAEVRRQNSDW--RAGTPGKPAVVA----NAAARTSSAGASTGAPD 301

Query: 203 EKAPTELKTPAKP-----SQSTDAEVMALEEKNHTLRLMLSQVQSEVSTLKEELGDENRI 257
                 L  PAK      SQ   A      ++    +  L+ +Q + + LK  + D   I
Sbjct: 302 TGDRLAL-MPAKANTGAGSQGGGAAGNGARQELLRTKESLASLQQQTTDLKARVKDLADI 360

Query: 258 RSEVERLLE-EERRKAEEASRLA 279
            S+ ERLL  ++ + AE  ++LA
Sbjct: 361 NSKNERLLSLKDNQIAELQAKLA 383



 Score = 43.5 bits (101), Expect = 9e-08
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 1541 DEEELKLDVGLDEFPDVIGDIRDIDVDSGAEAAGKLDLAKIYIEMNDEKGAIKLLEEAIV 1600
            D   L  D G D     + +  D  VD+      KLDLA+ YI+M D +GA  +L+E   
Sbjct: 721  DSMPLAADAGHD-----LSEFNDDPVDT------KLDLARAYIDMGDAEGARAMLDEVAK 769

Query: 1601 DGDDEIRQQAKRLIDVLN 1618
            +G    +  AKRL+D L+
Sbjct: 770  EGSQMQKDAAKRLLDSLH 787



 Score = 32.0 bits (71), Expect = 3e-04
 Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)

Query: 650 GLEIDQNSTELLDELL---DDLDLDDESI-------EATEFSVAPEKLS---VEDGTELF 696
           G ++DQ+  ELLD+L    DD+ L  E +       +   F  A E +    V+   + +
Sbjct: 543 GGDVDQD--ELLDQLAEHPDDISLHLELVTLYYSRRDVEHFEAAAEAMHAHIVDPQQDEW 600

Query: 697 DELLEIEQHPESAESL------PELATEDEFNSDTFIDDLLNSAPAKDPLLEPVLDENEA 750
            ++L + +       L      P L+ E E      IDD  +   A   +  P       
Sbjct: 601 QDVLHMGEDLAPGHPLFDHHAEPALSGEAEARGAFNIDDYADKGDAPTVVSAPPPLPPSG 660

Query: 751 FAQADDFDFNPEIEGGLEDDLSQPS--ALPANEFGT-----------PQD--EDWVFDED 795
                +++FN ++     +  ++P+  A PA +  T           P +    W F+ED
Sbjct: 661 SKPVSEYNFNFDLTRTAGETAARPAPTAAPAGDDATVVAPLASSRPAPTEPVSSWHFEED 720

Query: 796 DSSPTLEGNAELELSSAEDD 815
           DS P L  +A  +LS   DD
Sbjct: 721 DSMP-LAADAGHDLSEFNDD 739