Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 853 a.a., peptidoglycan-binding protein from Pseudomonas simiae WCS417
Score = 71.6 bits (174), Expect = 3e-16
Identities = 152/704 (21%), Positives = 253/704 (35%), Gaps = 115/704 (16%)
Query: 60 PTPQYSENIVRNSANNEPGRFFGPTSANQTLWSIASQLRPSSSVTVQQTLLAIYQLNPQA 119
P P+ + A ++P + T++ TLW IA++ R SV QQT+LAI LNP A
Sbjct: 144 PAPRLAAPASTAPAVSKPAQH--TTTSRDTLWEIAAKNRNGGSV--QQTMLAIQALNPDA 199
Query: 120 FENQNIHTLIPGSTLRVPSLAQISRNSTQDAVNIMASHQAKLNQTPDTPVRPVAPPR--P 177
F + NI+ L G LR+P Q + A+ +++ A Q P A +
Sbjct: 200 FIDGNINRLKTGQVLRLPDPVQSTSLPQPQAIAEVSAQNAAWRQGRRAANNPAAGKQQLD 259
Query: 178 APVATPKVEAVAQTPPQVTPTTAPQEKAPTELKTPAKPSQSTDAEVMALEEKNHTLRLML 237
A T A A T + + E A +K A S + ++ +E+ T R
Sbjct: 260 ATKRTQAGNAPASTGAKDNLSLVSAEAAKKGVKGKAGDSAALSDKLAMTQEQLDTTRRDN 319
Query: 238 SQVQSEVSTLKEELGDENRI----RSEVERLLEEERRKAEEASRLAPSAL---------- 283
+++S + L+ +L ++ ++ RL E+ A A+ P+ L
Sbjct: 320 EELKSRAADLQSQLDKLQKLIQLKNDQLARLQAEKGTPAAPATAAMPAQLAGEPVAAPAV 379
Query: 284 -------------------------------DNLLSNGWLVALLALIPGLLIAIVVLLLL 312
++LL+N ++ ++ GLL+ +++LL +
Sbjct: 380 PDAATATPAPAAPAPEPVKADATPASAEGKFNDLLTNPVVLGVIGGAAGLLVLLLLLLWV 439
Query: 313 NRRSSAQQENPTQNNITSEMPTAAPVTLGPEQTEDIGDDLLLDD-----------DLFST 361
R++ ++E + A + P T +I DL D L +
Sbjct: 440 RHRNARREEE-------KHLRMARALAEEPVFTSNIDQDLPPDSFEGLEVPPPNVKLAAA 492
Query: 362 TDDKEENDAEKAFSDEDDVFADLNETDLDFNLDGQDSDDLFVGIDDDGDLDTEFDALNES 421
+ A V A L N D+ + D G L+ D L ++
Sbjct: 493 PTPTPTVEPAVAVPTVASVLAPLAVAVAPVN--ASDALAQAQSLVDRGHLNQAADVLEQA 550
Query: 422 ANGISVNADDKALGLEEMERALNDVSEPTDNDDL--NSFDLADENQMSEDDIEALLSGDE 479
+D + +E N T L N + A Q+ +
Sbjct: 551 IKQEPKRSDLRLKLMEVYGLQNNKDGFVTQERQLVANGENHAQVEQLKSRFPAMAVLAAG 610
Query: 480 ENELLSDGKVDQSLLDDLL-------ASELDALDDE--------------PAIQDTETLD 518
+ ++ +D + DLL A+E +A D + A D +T +
Sbjct: 611 VSAAVAAAALDAQYVKDLLEDKPAPAATEPEAFDTDFDLSLDDLEEASPAEAKDDQQTFE 670
Query: 519 TLLNDELASLSEED---DDEFDLSGAGVAGDQDLDDLFASIEEQ-ADLEQLEAKAIDETA 574
+LL + + + D D + DL G A Q DD + +EEQ D+ +E + TA
Sbjct: 671 SLLQQQTEAKAAPDDLSDFDLDLQLDGPASAQSDDDFLSGLEEQMKDVPPVEPPTLAPTA 730
Query: 575 LLDEILAEQ------DAPLSEESTELLDELLDDFDKPENDEFDAQTADLLQPEEPILDLE 628
L D L E D P + + LDD N E D + L P
Sbjct: 731 LDDFDLPEDFDLSLADEPEAAAKPDAFASELDDV----NAELDRLSQSLEHPSIEPSFTA 786
Query: 629 EDSTQLLNEVLGEPVPE-ELASGLEIDQNSTELLDELLDDLDLD 671
ED+ Q G+ PE + SG + +L +D D D
Sbjct: 787 EDAAQ------GDDEPEFDFLSGTDEVATKLDLAQAYIDMGDAD 824
Score = 60.5 bits (145), Expect = 8e-13
Identities = 120/462 (25%), Positives = 176/462 (38%), Gaps = 74/462 (16%)
Query: 1171 AESEVESELELASDLEEEEPFTELNELDLPEYTEEDALADAQLEPA-VESEVEPELELAT 1229
A E E L +A L EE FT + DLP D+ ++ P V+ P
Sbjct: 444 ARREEEKHLRMARALAEEPVFTSNIDQDLPP----DSFEGLEVPPPNVKLAAAPTPTPTV 499
Query: 1230 EPAEEEAFPELDELDLP------EYTEEDALADAQ-------LEPAAEAEVEPELELASD 1276
EPA A P + + P DALA AQ L AA+ LE A
Sbjct: 500 EPAV--AVPTVASVLAPLAVAVAPVNASDALAQAQSLVDRGHLNQAADV-----LEQAIK 552
Query: 1277 LEEKETFTELDELDLPEY-TEEDALADAQLEPAAESEVEPELELASVLEEEDSFTELDEL 1335
E K + L +++ +D + + A E ++E + + F + L
Sbjct: 553 QEPKRSDLRLKLMEVYGLQNNKDGFVTQERQLVANGENHAQVE-----QLKSRFPAMAVL 607
Query: 1336 DLPEYTEKDALA-DAQLEPAAESEVEPELGDETETLAQETESDALVADEDLLASVESAVD 1394
A A DAQ V+ L D+ A TE +A D DL S++ ++
Sbjct: 608 AAGVSAAVAAAALDAQY-------VKDLLEDKPAPAA--TEPEAFDTDFDL--SLDD-LE 655
Query: 1395 EVQPELLGATQDVPPTQSLANKAFDEEALHDWLSDNPDGEKPFSFDRPLDAKTIDSAGMD 1454
E P A D +SL + + +A D LSD F D LD + D
Sbjct: 656 EASPA--EAKDDQQTFESLLQQQTEAKAAPDDLSD-------FDLDLQLDGPASAQSDDD 706
Query: 1455 IDAMLQMGGEDWNGFHLTPDQQAQLPD-DVPEDEQAIWASETPEPQAKPENWGSQEDLLD 1513
+ L+ +D L D D+PED A E PE AKP+ + S+ D ++
Sbjct: 707 FLSGLEEQMKDVPPVEPPTLAPTALDDFDLPEDFDLSLADE-PEAAAKPDAFASELDDVN 765
Query: 1514 FDPQR-DGYMTIDELMAQVESEEQGLNPDEEELKLDVGLDEFPDVIGDIRDIDVDSGAEA 1572
+ R + + +E+ DE E G DE
Sbjct: 766 AELDRLSQSLEHPSIEPSFTAEDAAQGDDEPEFDFLSGTDE------------------V 807
Query: 1573 AGKLDLAKIYIEMNDEKGAIKLLEEAIVDGDDEIRQQAKRLI 1614
A KLDLA+ YI+M D GA +L E + +GD+ R +AK ++
Sbjct: 808 ATKLDLAQAYIDMGDADGARDILSEVLTEGDEAQRGEAKEML 849